| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0691 |
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| Symbol | |
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| ID | 8131615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 812487 |
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| End bp | 814013 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644863976 |
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| Product | oligogalacturonide transporter |
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| Protein accession | YP_003016282 |
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| Protein GI | 253687092 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAC CAATCTCTTT TAAACATACG TTCTGCTACG GCAGCGCGAA CCTGCTTGGC
AGTGGCGCGC TTGCTATCAG CGGCGCATGG CTGATGTACT TTTACACCAC ATTTTGTGGA
TTAACATTAG TTCAGGCCGC CGCCATTTTC TCCGTTGCCA GCATCATCGA TGCTATCAGT
AACCCTATCA TGGGGTACAT CAGCGATAAC TTCTACAACA CCCGTATTGG TCGCCGGTTT
GGCCGCCGCC GCTTCTTTAT TTTGCTCGGT GTCCCGCTGG TTCTGGTTTA CCCCATGCTG
TGGGTTGATG GCTTTGGTTT TTGGTACTAC CTGGCGACAT ACGTGCTGTT CGAGCTGATT
TACACCTCGA TTATGGTGCC GTATGAAACG CTGGCGACCG AAATGACCTC CGATTTCAAA
CTGCGTTCTA AACTGACGGG TTCTAAAGCC ATTTTCGGCA AAATCGCAAA CTTCCTGGCG
GCATTTATTC CTGGGCAGTT TATTGCCGTC TACGGTAAAG ACTCCTCGAC GCCATTCTTC
TACACCGGTC TGGTCTACGG CGCCATTATG TGTGCGGCAA TGATCGCACT GTATATGACT
TCCTGGGAGC GCCCGGTCAA CGAAATCGTC CGTGAAAGCA CTTCTAGTCT GTGGCAGGCG
ATGAAAAAGC TGAGCGTGGA TATGGTTTCT ACCTTCCGCC TGCGTATTTT CCGCAAACAT
CTGGGAATGT ACCTGTTTGG CTTTGGCGCT GAGTGGCTGT TCGCTTCCGC CTTCACCTAC
TTCATCGTTT TTGGTCTGAA ACAGAATACA GCGCTGGTAT CACACCTCAA TAGCTTCAGT
TCGGTCATGC AGCTGATTTC TACCGCAGCC TTCATCGGTA TCTGCGTCAA AATGGGCTTT
GCGCGACCGT TCCGTTTAGC GTTGATGATA GTGATTGTTA GCGTCATCGC CTATGCCGCG
CTCTATTTTG CTAACTGGTC AGAAGACATG ACCATCTTTG TTCTGTTTGC CATCACTGCC
GTATTTGGCC TGAGCACAGG TGGCATCTAC TACATTCCCT GGACGGTTTA TACCTTCCTG
GCTGACGTGG ATGAAGTCCT GACCGGTCGT CGCCGTGAAG GGATCTACGC GGGCGCCATG
ACGTTTGCCG GCAAAATGGT GCGTTCTGTG ATTGTCTTCG CCATGGGTTG GACGCTGAGC
CAATTCGGCT TTGTCTCCGG GCAGTCGGCA CAACCGGAAT CAGCCGTGCA GGCGATTGTT
GGCGTGTTCT CACTGGGCGT TATCGGCCTT GCGCTGGTTG CCATTTACTA CACGACGCAG
ATGAAGCTGG ATCGTAAGAA CCACGCCATC CTGTTGGAAG AAATTGCACG TATCAAAGCG
GGTGGCGCCA TTGCCGATGT ACCGCCTCAC GCACGTGCTG TCGCAGAAGA ACTGACAGGT
TGGGAATATG AGAAATGCTG GGGCAATAAC CCGTTAGGCG TTCAGTCTGA AGAGACAAAA
CCGCAGGTTG CTACTGCGCA GCATTAA
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| Protein sequence | MNKPISFKHT FCYGSANLLG SGALAISGAW LMYFYTTFCG LTLVQAAAIF SVASIIDAIS
NPIMGYISDN FYNTRIGRRF GRRRFFILLG VPLVLVYPML WVDGFGFWYY LATYVLFELI
YTSIMVPYET LATEMTSDFK LRSKLTGSKA IFGKIANFLA AFIPGQFIAV YGKDSSTPFF
YTGLVYGAIM CAAMIALYMT SWERPVNEIV RESTSSLWQA MKKLSVDMVS TFRLRIFRKH
LGMYLFGFGA EWLFASAFTY FIVFGLKQNT ALVSHLNSFS SVMQLISTAA FIGICVKMGF
ARPFRLALMI VIVSVIAYAA LYFANWSEDM TIFVLFAITA VFGLSTGGIY YIPWTVYTFL
ADVDEVLTGR RREGIYAGAM TFAGKMVRSV IVFAMGWTLS QFGFVSGQSA QPESAVQAIV
GVFSLGVIGL ALVAIYYTTQ MKLDRKNHAI LLEEIARIKA GGAIADVPPH ARAVAEELTG
WEYEKCWGNN PLGVQSEETK PQVATAQH
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