| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0688 |
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| Symbol | |
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| ID | 8131612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 809654 |
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| End bp | 810178 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863973 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003016279 |
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| Protein GI | 253687089 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.959596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAGAGTC CCGCCGCTGT CTGCCCCAAT CAGCCTGAAA CCTTAAACGT TCAGCAGATT
TATCATGACC ATCATGCCTG GTTACAGGCG TGGTTGCGTC GGCGTTTGGG GTGTTCACAG
CAGGCTGCGG ATCTGGCGCA GGATACGTTC CTACGTTTGA TCTGCCAGCC TCAGGGCGAT
CGTATCCGTG AACCGCGCGC CTGGTTGACG ACCGTGGCGC ATGGGCTGAT GGTGAATCAC
TGGCGGCGTA AAGATATCGA GAATGCTTAC CTTCAGGTGC TGGCAGAGCA GGAATTTCAT
TTTGCTCCCT CGCTGGAGCA GCAGGCGATG GTGGTTGATG CGCTGTTAGC CATCGATCAG
ATGCTGGCGA CGCTACCCGG CAAAGTGCGT CAGGCATTCT TGTTGGTGCA TCTTGACGGT
TTGACCTATC GACAGGTCGC TGAACAATTA GCCGTTTCCG AGCGGATGGT AAAAAAATAT
ATGGCACAGG CGATGCTGAA TTGTCTATTG TGTCAGGACT TATGA
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| Protein sequence | MKSPAAVCPN QPETLNVQQI YHDHHAWLQA WLRRRLGCSQ QAADLAQDTF LRLICQPQGD
RIREPRAWLT TVAHGLMVNH WRRKDIENAY LQVLAEQEFH FAPSLEQQAM VVDALLAIDQ
MLATLPGKVR QAFLLVHLDG LTYRQVAEQL AVSERMVKKY MAQAMLNCLL CQDL
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