| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0687 |
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| Symbol | |
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| ID | 8131611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 807087 |
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| End bp | 809480 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644863972 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003016278 |
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| Protein GI | 253687088 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.862135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAAAT TCCGTACCCA CATGTTGGCG CGTGCTTTAC GTGCTGGGGT ACTTGGGGCA
TCGTTTGCCT CAGTGCTGCC GATGGCGGCG GTCTATGCGG CATCAGTGGC ACCTGTCCAA
CAATATGCGG TGTCGTCCGG TCCGCTCAAT CAGGTGCTCA ATCAATTTGC CCAACAGGCG
GGCGTATTAC TTTCTTACGA TCCGGCATTG GTCGCGGGTA AACGCGGTGC TGGGTTGCAG
GGGAATTACA GCGTCGAACA GGGCTTCCAG CAGATTCTCA GCAGCAGTAG CCTCAGTGCA
CAGTACAGCG CCGATGGCAG TGTGACGCTA GTGCAGCGTA CGGCGACTGC GCCAGTCCCC
GTTACCGCGC CTGCTACGAC TAAAAACGAT CGGATCGTTG TCACCGCTCC ACCGAATACA
GCGATGAAGC TGGATGTGCC GATTTCAGAG ACGCCACGTG CGGTTGCCGT TGTCACAGAG
AAGCAGATCG AAGAGCGTGG AGCACAAAAG ATCGATCAGG CGCTGCGCTA TAGCAGCGGG
ATTCTGGCTA CGCCATACGG GCCGGATAAT AAAGCCGAAT GGGTGACCAT TCGTGGGTTT
AGCGATCAAT CCCGGTTCCA GAATGGTCTG GCGACGCTGA ATGAAGATGG GTTCTATGGC
CAGCAGATTG AACCGTTCGG CGTTGAACGT ATCGAAGTCC TGAAAGGCCC AGCCTCGGTG
CTGTACGGAC AAAACCCGCC GGGTGGTCTG GTTAACGTCA TCACCAAACG TCCTACGCGT
TTGCCGCAGG GGAAAGTGGA GCTGGAATAC GGCTCTAACG ACTATCGCCA CTTGGCCGTT
GACAGTGCAG GTCCGTTAAA CGATGACGGC TCAGTGCTAT ACCGGGTTGT TGCGCTGGCG
CGCGATACCT CGGGTGAGGT GGATTTCTCT AAGAGTAAGC GTTTCTATTT AGCACCTAGC
GTCACATTCC TTGGGGAAAA CACGGAACTG ACCGTGTTAG CCAGCTACAT GGATACGAAA
TCCGACATGA CCAATGGCTT TAAACTGCCG TACGGTACGC TGCATAACAC GCCGTTTGGT
AAAGTTGGCT ATAAAACCTC GCTGGGTGAA CCGGGGATTA ACAATCACGA TACCCGTCAG
TTCAATCTGG GCTATGAATT CACGCATCAT CTGAATGACA CCTGGACGTT CCACCAGAAC
CTGAATTATT CCTATCTGAA TATGGATCTG CGCGGTGCTT ATGTGCTGGG GATGTATACC
GATCCGGTAA CGAATGTTGT CAGCGATCGG TTAGCCAATC GTGGGTTGAC CTACCGCGAC
GGTTTTGCGC AAAACTGGGC TACCGATAAC CGCCTGGTTG GCGAATGGCA GTGGGAGAAT
ATTGAGAATA CGCTGCTGCT CGGGTTCGAC TATCGTCGTG CCAATACGCA AAGCCGCGAT
GCGAACCTGT ACTCCTTTGG TGCCCCTATC GATATTTTTA ATCCGGTTTA CGGTAACTAT
ACGTCACCGG ATAGTCAGCT CTTTGATCAC CGCTCTGGTC GCCATCAGAC CGGTTATTAC
GTCCAGAACC AGATCAAGTA CGATGATCGT CTGATTTTCT TGCTGGGTGG ACGTTACGAC
GTGGCGAAAT CTCGTGACCG TAATTTTTCA TCAGGCGCGG ATACCCGCAC TGATGATACC
AAGTTCACCA AGACTGCCGG GGTAATGTAC CTGTTTGATA ACGGTATTTC CCCTTACATC
AGTTATTCGG AATCGTTCCT TCCTGTGTCA GGCCGTGATA GTTACGAACG TCCTTATGTA
CCGGAAGAAG GCCAGCAGAC GGAAATTGGC GTGAAATACA CGCCGGAAGG CTTTAACGGC
TATGCCTCCG CTGCCCTGTT TAATCTGGAA CAAAAAAACG TTAAAACGAC GGATCCTAGT
AACCCAAGTA TGACCATTCA GGCGGGGGAA GCGCGTTCAC GCGGCCTTGA GCTGGAATTG
AGCGGTGAGG TTTATACGGG TCTGACGCTG ACGGCAAACT ATACATACAA CGAAGTGGAG
ACGACCAAAT CAGGTACCGT CGGTGAAGTG GGCAAACGCC TGCCGGGCTT GCCTGAACAC
ATTATGTCTG GCTGGGCGAC CTATGCCTTT AACGGCAAAC TGGAAGGGTT AAGCATCGGC
AGCGGCGTAC GCTATGTGGG CAGTTCTTAC GGTGATATTG CCAATACGGC GGACATGAAG
GTTCCTGCTT ATACGCTGTG GGATGCGATG ATCGCCTATG ATTTCAGCAA AGACTGGCGC
TTGCAGGTCA ATGCAACCAA TCTGACAAAC CGCGAGTATG TCAGCGCCTG TAACTACTGG
TGCTACTACG GTGAAGGCCG CAACATTAGC GCGAACGTCA GCTATCGTTG GTAA
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| Protein sequence | MVKFRTHMLA RALRAGVLGA SFASVLPMAA VYAASVAPVQ QYAVSSGPLN QVLNQFAQQA
GVLLSYDPAL VAGKRGAGLQ GNYSVEQGFQ QILSSSSLSA QYSADGSVTL VQRTATAPVP
VTAPATTKND RIVVTAPPNT AMKLDVPISE TPRAVAVVTE KQIEERGAQK IDQALRYSSG
ILATPYGPDN KAEWVTIRGF SDQSRFQNGL ATLNEDGFYG QQIEPFGVER IEVLKGPASV
LYGQNPPGGL VNVITKRPTR LPQGKVELEY GSNDYRHLAV DSAGPLNDDG SVLYRVVALA
RDTSGEVDFS KSKRFYLAPS VTFLGENTEL TVLASYMDTK SDMTNGFKLP YGTLHNTPFG
KVGYKTSLGE PGINNHDTRQ FNLGYEFTHH LNDTWTFHQN LNYSYLNMDL RGAYVLGMYT
DPVTNVVSDR LANRGLTYRD GFAQNWATDN RLVGEWQWEN IENTLLLGFD YRRANTQSRD
ANLYSFGAPI DIFNPVYGNY TSPDSQLFDH RSGRHQTGYY VQNQIKYDDR LIFLLGGRYD
VAKSRDRNFS SGADTRTDDT KFTKTAGVMY LFDNGISPYI SYSESFLPVS GRDSYERPYV
PEEGQQTEIG VKYTPEGFNG YASAALFNLE QKNVKTTDPS NPSMTIQAGE ARSRGLELEL
SGEVYTGLTL TANYTYNEVE TTKSGTVGEV GKRLPGLPEH IMSGWATYAF NGKLEGLSIG
SGVRYVGSSY GDIANTADMK VPAYTLWDAM IAYDFSKDWR LQVNATNLTN REYVSACNYW
CYYGEGRNIS ANVSYRW
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