| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0683 |
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| Symbol | actP |
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| ID | 8131607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 801000 |
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| End bp | 802658 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863968 |
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| Product | acetate permease |
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| Protein accession | YP_003016274 |
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| Protein GI | 253687084 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAC GCTTTATGAT GCTGTTCGGG CTTTTGACGC TGCCGGTGCT TGCGTGGGCG
GCAGATGCCC TCACAGGGGA TGTTCAACGC CAGCCGTTGA ATATTCAAGC CATCGTGATG
TTTCTGTTGT TCGTCGGCGG TACGCTGTAT ATCACCTATT GGGCGTCGAA GAAAACCCGT
TCACGAAGCG ATTATTATAC GGCTGGCGGC AACATTACCG GTTTCCAGAA CGGGCTGGCG
ATTGCGGGTG ACTACATGTC CGCCGCGTCC TTCCTCGGGA TTTCTGCGCT GGTCTATACC
TCCGGCTATG ACGGCCTGAT CTACTCACTC GGCTTTTTGG TCGGCTGGCC AATTATTCTG
TTTCTGATCG CTGAGCGACT GCGCAACCTC GGACGTTATA CCTTTGCTGA CGTCGCCTCC
TACCGTTTGC AACAGCGCCC GATCCGTAGC CTTTCCGCCT GTGGTTCACT GGTGGTTGTG
GCCTTGTACC TCATTGCACA AATGGTGGGC GCGGGGAAAC TTATCGAACT GCTGTTCGGC
CTCAACTACC ATGTAGCCGT GATACTGGTC GGTATTCTGA TGGTGATGTA CGTCATGTTT
GGCGGCATGC TCGCCACCAC ATGGGTACAG ATTATTAAAG CCGTCCTGCT GCTATTCGGC
GCCACCTTCA TGGCCGTCAT GGTCATGAAA TCCGTCGGCT TCAGCTTTGA CGCACTGTTC
AAGCAGGCAA TGGCGGTTCA CCCAAAAGGC GCTTCGATCA TGAGCCCGGG CGGACTGGTT
TCTGACCCCA TCTCCGCGCT GTCCCTCGGG TTAGGTCTGA TGTTCGGTAC CGCCGGTCTG
CCGCACATTC TGATGCGCTT CTTCACCGTC AGCGATGCCA AAGAAGCACG AAAGAGCGTG
TTCTACGCCA CCGGGTTCAT GGGTTATTTC TACTTCCTGA CCTTCATCAT CGGCTTCGGC
GCCATCCTGT TGGTCAGCGC TAATCCGGAG TTTAAGGACG CGACAGGCGC ACTCATCGGT
GGTAATAACA TGGCGGCGGT GCATCTGGCT GATGCGGTCG GCGGCGACTT CTTCCTCGGC
TTTATCTCCG CCGTAGCCTT TGCCACCATT TTGGCGGTCG TCGCCGGTCT GACGCTGGCA
GGCGCTTCTG CCGTGTCCCA CGATCTCTAC TCTAATGTGA TCAAAAAAGG GAAAGCGACA
GAGCGTGATG AGCTGAAAGT CTCGAAAATC ACCGTGCTGG TGCTGGGTGT CGTGGCGATT
TCGCTCGGTA TTCTGTTTGA GAACCAGAAT ATCGCCTTCA TGGTCGGTCT GGCCTTCTCC
ATCGCTGCCA GCTGTAACTT CCCGATCATT ATCATCTCGA TGTACTGGTC AAAGCTGACG
ACACGCGGCG CCATGATTGG CGGCTGGGCT GGGCTGCTTA CGGCTGTTAT TTTGATGATA
TTGGGGCCAA CTATCTGGGT GAAAATCCTC GGTCACGCCA CCCCTATTTA CCCTTACGAT
TATCCAGCGC TCTTCTCCAT GCTGGTCGCG TTTATCGGTA TCTGGTTCTT CTCCATCACC
GATCGCTCCG AAGCGGGACA GCAGGAACGT GCTCGTTTCC ATGCGCAGTT TGTCCGCTCA
CAAACCGGCG TCGGCGCTTC AAAAGGCAGT TCCCACTAA
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| Protein sequence | MKIRFMMLFG LLTLPVLAWA ADALTGDVQR QPLNIQAIVM FLLFVGGTLY ITYWASKKTR
SRSDYYTAGG NITGFQNGLA IAGDYMSAAS FLGISALVYT SGYDGLIYSL GFLVGWPIIL
FLIAERLRNL GRYTFADVAS YRLQQRPIRS LSACGSLVVV ALYLIAQMVG AGKLIELLFG
LNYHVAVILV GILMVMYVMF GGMLATTWVQ IIKAVLLLFG ATFMAVMVMK SVGFSFDALF
KQAMAVHPKG ASIMSPGGLV SDPISALSLG LGLMFGTAGL PHILMRFFTV SDAKEARKSV
FYATGFMGYF YFLTFIIGFG AILLVSANPE FKDATGALIG GNNMAAVHLA DAVGGDFFLG
FISAVAFATI LAVVAGLTLA GASAVSHDLY SNVIKKGKAT ERDELKVSKI TVLVLGVVAI
SLGILFENQN IAFMVGLAFS IAASCNFPII IISMYWSKLT TRGAMIGGWA GLLTAVILMI
LGPTIWVKIL GHATPIYPYD YPALFSMLVA FIGIWFFSIT DRSEAGQQER ARFHAQFVRS
QTGVGASKGS SH
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