| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0678 |
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| Symbol | |
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| ID | 8131602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 792842 |
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| End bp | 794629 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644863963 |
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| Product | hypothetical protein |
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| Protein accession | YP_003016269 |
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| Protein GI | 253687079 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCAGC ACATAGCGCA TTTCTGGGAT AGCCAGCAAC ACGACAGTCA GCAGCAGAAC
GTTCAACACG AGGCTACACC ACGCACCGCG GGTTCCCGGG CGTTACGGAT CGCGGTGACC
CTTGCCTGTT TGGGGCTGGC CGGCTGTGCC GTCAAGCCGG AGCCGGTGAC GATCGAACAG
CAGGTCGCAC AGGCACTGAG CGACAGAACG CAGATGTTCG CCAATCAGGA ACCGGTGCGC
GGCACGATCA CGCTGGATGA GGCGATTGCC CGTGCGCTGA AATACAACCT GCAACAGCGG
GTCGCACTGA TGGAACAGGC GATGGAAGAT GACCTGTTGG GCGTACAGAA TCTGGACATG
CTGTTACCTA AACTGACTGC CCGTGCTGGC CTGCAAACTC GCGATAACGT CGCCGGTTCC
AGCAGCCAGT CGGTTACCAC GGGTCGGCAA TCGCTGGAAG CGTCCACCAG TCAGGATCAG
ACCCAGCGCA CCGCCGATCT GACGATGAGC TGGAATGTGC TGGATTTTGG TATCAGCTAT
TTCAACGCCA AAGTACAAGC GAACAAATCG CTGGCGGCGG AAGAGCGTCG TCGTCGTGTG
GTCGCGGATA TTACCCGTCA GGTGCGGACA GCCTATTGGG AAGCGGCAAC GGCGCAGCGT
TTGCAGCCAG AAGTGACGAC TGCGTTGACG CAGGCGCGTC AGGCGCTGGA ATACGCGCGT
CAGACTGAGC AACAGCGTCT GCTGGCACCG GTTGAGGCGT TGCGTTTCCA GAAAAACATG
CTGGAGATGG TACGCCAGTT GGAAATCGTT GACAGCGATC TGGTGGTGGC GAAATCCCGT
CTGGCTGCGC TGATGAACCT GCCGCCGTCG AGTAAATACG ATGTCGTCGT ACCGAGCGAA
AGCAGTCTGG TCGCGCCGAA GATGGCTTAT TCGCTCGACG ATCTGGAAAA CTTCTCGATG
GTTAAACGCC CGGAAGTGCG TGAAGAGAGC TATCTGGCAC GCAATAGCGT ATTGGAAACC
CGCAAATCGT TGCTGCGCCT GCTGCCGGGT GTGTCGCTGT TTGCCGGTAT CAACGGCGAC
AGCAACAGCT ATCTGGTCAA TCACCAGTGG GCAAACGCGG GCGTTCAGGT CAGCGGCAAC
CTGCTGAACG TGCTGTCGTG GTCGTCGGTT AAACGTGCCG GACAGGCGAA TGAAGATCTG
GCGGAAGTTC GTCGTCAGGC GCTACGCATG GCGGTGCTGA CGCAGGTGAA CGTTGCCTGG
CAGGAGTATC AGCAGAGTAC GCGGATGTTC GGTCGCTATC AGGAACTGGC GCGGATTCAG
CGCGGTATCC TCAACCAGAC CACGCTCAGC GTACAGCATC GTGCCGAAAC GCAAATGGAG
CAGGTACGCG TCAGCACCGA AACCATTCTG ACTACTCGCG CACGTGACCG CAGTTTTGCC
GATGTGCAGA ACGCGCTGGG CGCGGTGTAT CAGGCTGCCG GGCTGGATGT GCTGCCGGAT
AACGTGAACG ATGTCAGTCT GGCGGCGCTG AGCAACTCGA TTGCCCGCAC CACAGGGAAC
CTTGAAAAAG GTGGCGTTGC CGTGCCGCGT CTGTCTCTGT CAACACCGGC TACGCCTGCC
ACCACGACGG CTCCTGCCGT CACTGCTTCT GCAACAGGTT CCGCTGTCAC GAAGCCCATC
ACGCCTGTGG CGGTAACGCC ATCGGCCAAC GCGGGGAAAC CATACCGCGT CGTAAATACG
GATATGTGGG ATAACCTGCA ATCCCTACAG GCCGGAGGTT CGCGTTAA
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| Protein sequence | MNQHIAHFWD SQQHDSQQQN VQHEATPRTA GSRALRIAVT LACLGLAGCA VKPEPVTIEQ
QVAQALSDRT QMFANQEPVR GTITLDEAIA RALKYNLQQR VALMEQAMED DLLGVQNLDM
LLPKLTARAG LQTRDNVAGS SSQSVTTGRQ SLEASTSQDQ TQRTADLTMS WNVLDFGISY
FNAKVQANKS LAAEERRRRV VADITRQVRT AYWEAATAQR LQPEVTTALT QARQALEYAR
QTEQQRLLAP VEALRFQKNM LEMVRQLEIV DSDLVVAKSR LAALMNLPPS SKYDVVVPSE
SSLVAPKMAY SLDDLENFSM VKRPEVREES YLARNSVLET RKSLLRLLPG VSLFAGINGD
SNSYLVNHQW ANAGVQVSGN LLNVLSWSSV KRAGQANEDL AEVRRQALRM AVLTQVNVAW
QEYQQSTRMF GRYQELARIQ RGILNQTTLS VQHRAETQME QVRVSTETIL TTRARDRSFA
DVQNALGAVY QAAGLDVLPD NVNDVSLAAL SNSIARTTGN LEKGGVAVPR LSLSTPATPA
TTTAPAVTAS ATGSAVTKPI TPVAVTPSAN AGKPYRVVNT DMWDNLQSLQ AGGSR
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