| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0656 |
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| Symbol | |
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| ID | 8131580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 759227 |
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| End bp | 760711 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644863941 |
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| Product | permease for cytosine/purines uracil thiamine allantoin |
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| Protein accession | YP_003016247 |
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| Protein GI | 253687057 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.871285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAAA AAACAATGAC AGGTAATGGT AGCAACGCGT ACAGCCCCAA ACTTTGCAAT
GAAGATCTGG CACCGACACG CGCTCAAACC TGGTCCTGGT ACAACATCTT TTCATTTTGG
ATGTCAGATG TGCACAGCAT GGGTGGGTAT GTTGTTGCAG CCAGCTTTTT TGCACTGGGG
TTGGCAAGCT GGCAGGTGTT GCTGTGTCTG CTTGTGGGCA TCTGTATTGT GCAGGTGTGC
GCAAATTTGG TGGCCAAACC AAGCCAGATG AGCGGCGTTC CTTATGCGGT AATCTGCCGC
CAGGCATTCG GTGTCTTTGG CGCGAATATT CCCGCAGTCA TTCGTGGTCT CATCGCTTTT
GCCTGGTACG GGATTCAAAC ATACCTAGCC GCACATGCGC TTATGCTGGT TCTATTGAAG
TTTTATCCTT CACTGGCCCC ATTGACACAA AGTCACTGGC TCGGCCTGTC TGCGCTGGGG
TGGATCTGCT TTGGCATCAT GTGGTTCCTG CAAGCACTCG TGTTCTGGCA TGGCATGAAC
GCAATTAAAC GTTTTATCGA TTTTGCAGGC CCAGCGGTTT ATGTGGTGAT GACAGCGCTC
GCAATCTGGA TTGTTTATCA GACCGGATGG GAGAACATTT CTTTTACGCT GACCAGCAAA
ACACTCACGA CCAGCGAGCA ACTTTGGCAA ATGCTTACCG CCACTGCGCT AGTCGTTTCC
TACTTTTCCG GCCCGCTGTT GAATTTCGGT GATTTTTCCC GCTACGGTAA AAGCATGCAG
GAAATCCGTC GCGGCAACCG TTGGGGCCTG CCGTTCAATT TTCTGCTGTT CTCTATTATC
ACCGTGGTTA TCGTTTCAGG AACACAGTCA TTATTCGGCC GCATGATTAC CGATCCGATT
GAAACCGTCG CACATATTGA CAGCGGTTTT GCCGTCGCGC TTGGTGTGTT GACCATGATT
ATCGCCACCA TCGGGATCAA TATTGTTGCT AACTTCGTCT CGTCAGCGTT TGATTTTTCC
AACTGTTCAC CGCAGCGTAT CAGCTTCCGC ACGGGGGGGA TGATCGCGGC AGTTGGCTCC
GTCTTGCTCA CGCCGTGGAA CCTCTTCAAT TCGCCAGAGC TTATTCACTA CACGCTCGAC
GTACTCGGTG CCTTTATCGG CCCGCTGTTT GGTATTCTGC TGATGGATTT CTATGTCATC
AAAGGAGGGA AAGTCTATGT GGACGACCTG TTCGACGCGA CGCCAAAAGG GAAATACTGG
TACCGAAACG GCTTCAATCC GAATGCGATC ATGGCGTTAA TTCCCGCAGT GAGCATTGGG
CTCATTATCA CCTTCACACC ACAGTGGCGC GACGCGGCCA ATTTCAGTTG GTTTATCGGC
GCATTCCTTG CCGCTGGCTG CTACCGCTAT CTGGCACGCC ACGAATGCGT TGGTGCGATG
AGAAAACCCT TCGCTCCGCA CGGGTTACTG TTAGAAAAAG AATAA
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| Protein sequence | MPEKTMTGNG SNAYSPKLCN EDLAPTRAQT WSWYNIFSFW MSDVHSMGGY VVAASFFALG
LASWQVLLCL LVGICIVQVC ANLVAKPSQM SGVPYAVICR QAFGVFGANI PAVIRGLIAF
AWYGIQTYLA AHALMLVLLK FYPSLAPLTQ SHWLGLSALG WICFGIMWFL QALVFWHGMN
AIKRFIDFAG PAVYVVMTAL AIWIVYQTGW ENISFTLTSK TLTTSEQLWQ MLTATALVVS
YFSGPLLNFG DFSRYGKSMQ EIRRGNRWGL PFNFLLFSII TVVIVSGTQS LFGRMITDPI
ETVAHIDSGF AVALGVLTMI IATIGINIVA NFVSSAFDFS NCSPQRISFR TGGMIAAVGS
VLLTPWNLFN SPELIHYTLD VLGAFIGPLF GILLMDFYVI KGGKVYVDDL FDATPKGKYW
YRNGFNPNAI MALIPAVSIG LIITFTPQWR DAANFSWFIG AFLAAGCYRY LARHECVGAM
RKPFAPHGLL LEKE
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