| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0649 |
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| Symbol | lysS |
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| ID | 8131572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 752253 |
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| End bp | 753770 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863933 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_003016240 |
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| Protein GI | 253687050 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAT CACAATCACA GGGTGCCGAT CAGGCGCAGG ATCTGAATAA CGAATTAAAA
ACGCGTCGTG AGAAGCTGGT GGCGCTGCGT GAAACCGGGA TCGCATTCCC GAATGATTTC
CGCCGTGACA GCACGTCCGA TCGTCTGCAC GCTGAGTTCG ATGGCAAAGA GAACGAAGAG
CTGGAAGAAC TGGGCGTTGA AGTGACCGTG GCGGGCCGTA TGATGACCCG TCGCATCATG
GGTAAAGCCT CTTTTGTGAC CTTGCAGGAC GTCGGTGGCC GTATTCAGCT GTATGTTTCC
CGCGACGATC TGGCGGAAGG CATCTATAAC GAGCAGTTCA AGAAGTGGGA TCTGGGCGAT
ATTCTGGGCG CACGCGGTAA GCTGTTCAAA ACCAAAACTG GCGAGTTGTC TATCCACTGC
ACCGAACTGC GTCTGCTGAC TAAAGCGCTG CGTCCGCTGC CGGATAAATT CCACGGCCTT
GCCGATCAGG AAACCCGCTA TCGTCAGCGC TATCTGGATC TGATCGCTAA CGACGAATCT
CGCAATACCT TCCGTATTCG TTCCAAAGTG ATGGCGGCGA TCCGTAGCTT TATGGTCGAT
CACGGCTTCA TGGAAGTTGA AACACCGATG ATGCAGGTGA TCCCAGGCGG TGCATCTGCC
CGTCCGTTCA TCACGCACCA TAACGCGCTG GACATCGATA TGTACCTGCG TATTGCGCCG
GAACTGTACC TGAAGCGTCT GGTCGTTGGT GGCTTCGAGC GTGTGTTCGA AATCAACCGT
AACTTCCGTA ACGAAGGCGT TTCCCCACGT CACAACCCTG AATTCACCAT GATGGAACTT
TATATGGCGT ATGCCGATTA TAAAGACCTG ATTGTGTTGA CGGAAAACCT GTTCCGTACA
CTGACGCAGG ACGTGCTGGG CTCGACGACG GTTGAATATG GCGACCAGAC ATTCGACTTC
GGTAAGCCGT TCGAGAAGCT GACGATGCGT GAAGCGATCT GCAAATACCG TCCTGAAACC
AACGTCGCCG ATCTGGACGA TCTGGAGAAA GCGACTGCGA TCGCTCAGTC TCTGGGGATA
AAGATCGAGA AAAGTTGGGG GCTGGGCCGT ATCGTTACCG AGATCTTCGA AGAGACGGCA
GAAAGCAGCC TGATCCAACC GACCTTCATC ACTGAATATC CAGCTGAAGT GTCGCCGTTG
GCGCGTCGTA ACGATCAGAA CCCAGAAATC ACCGACCGCT TTGAGTTCTT CATCGGCGGG
CGTGAAATCG GTAACGGCTT CTCCGAGCTG AATGATGCCG AAGATCAGGC AGAGCGTTTT
GCTCAGCAGG TGAATGCGAA AGACGCGGGC GATGACGAAG CGATGTTCTA CGACGAAGAC
TACGTGACGG CGCTGGAACA CGGCCTGCCG CCGACTGCGG GTCTGGGTAT CGGTATCGAC
CGTATGGTGA TGTTGTTCAC TAACAGCCAC ACCATCCGCG ACGTGATCCT GTTCCCGGCG
ATGCGTCCAC AGAAATAA
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| Protein sequence | MAESQSQGAD QAQDLNNELK TRREKLVALR ETGIAFPNDF RRDSTSDRLH AEFDGKENEE
LEELGVEVTV AGRMMTRRIM GKASFVTLQD VGGRIQLYVS RDDLAEGIYN EQFKKWDLGD
ILGARGKLFK TKTGELSIHC TELRLLTKAL RPLPDKFHGL ADQETRYRQR YLDLIANDES
RNTFRIRSKV MAAIRSFMVD HGFMEVETPM MQVIPGGASA RPFITHHNAL DIDMYLRIAP
ELYLKRLVVG GFERVFEINR NFRNEGVSPR HNPEFTMMEL YMAYADYKDL IVLTENLFRT
LTQDVLGSTT VEYGDQTFDF GKPFEKLTMR EAICKYRPET NVADLDDLEK ATAIAQSLGI
KIEKSWGLGR IVTEIFEETA ESSLIQPTFI TEYPAEVSPL ARRNDQNPEI TDRFEFFIGG
REIGNGFSEL NDAEDQAERF AQQVNAKDAG DDEAMFYDED YVTALEHGLP PTAGLGIGID
RMVMLFTNSH TIRDVILFPA MRPQK
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