Gene PC1_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0623 
Symbol 
ID8131546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp724845 
End bp725237 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content53% 
IMG OID644863907 
Productglycine cleavage system protein H 
Protein accessionYP_003016214 
Protein GI253687024 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATG TACCAGCAGA ATTAAAATAC ACCACGTCGC ACGAATGGGT TCTGCACGAG 
GGTGGTGGTA TCTACAGCGT GGGTATTACC GAACACGCGC AGGAGCTTCT GGGTGACATG
GTCTTTATCG ATTTACCTGA AGTGGGCACG GTAGTCGCCG CAGGCGATGA CTGCGCGGTG
GCGGAGTCGG TAAAAGCGGC GTCGGATATT TATGCGCCCA TCAGCGGTGA AATCGTGGAA
GTGAACGACG ATCTGGAAAG CTCCCCTGAA CTGGTCAACA GCGCGCCTTA TGCGGATGGC
TGGCTGTTCC GCATCAGAAT TTCTGATGAG TCTGATTTGG ACGAACTGCT TGATGCCGAA
GGCTATCAGG CATCGTTAGA AGAAGACGAG TAG
 
Protein sequence
MSNVPAELKY TTSHEWVLHE GGGIYSVGIT EHAQELLGDM VFIDLPEVGT VVAAGDDCAV 
AESVKAASDI YAPISGEIVE VNDDLESSPE LVNSAPYADG WLFRIRISDE SDLDELLDAE
GYQASLEEDE