| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0619 |
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| Symbol | |
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| ID | 8131542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 718518 |
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| End bp | 720197 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863903 |
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| Product | acetolactate synthase |
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| Protein accession | YP_003016210 |
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| Protein GI | 253687020 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR02418] acetolactate synthase, catabolic |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.395948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGT CCACCGAGCA GCAAAGCTGG AGTTGCGGAG CCGAGCTGAT TGTAAAACAC
CTGGAAGCGC AGGGCGTAAA GCATATTTTT GGTATTCCCG GCGCTAAAAT CGATCGCGTG
TTTGATGAGC TGGAAGACTC GACGATTCAA ACGATCCCAG TACGGCATGA GGCGAACGGC
GCATTTATGG CGGCGGCGAT AGGTCGCCTC ACGGGGAAAG CGGGGGTGAC GCTGGTGACA
TCTGGCCCCG GCTGCTCCAA TCTGGTCACC GGGCTGGCCA CGGCAACCGC AGAAGGCGAT
GCGGTTGTGG CATTAGGCGG GGCGGTTAAG CGTGCGGATA AGCTTAAACT GACGCACCAG
AGTCTGGACA CCGTCAGCCT GTTTCAGCCA GTCAGTAAAT TTAGCGCGGA AGTCACCGCA
TCCAGTGCCA TCTCGGAAGT GCTGGCGAAT GCGTTTCGGG CAGCGGAAAG CGGCCGTCCG
GGGGGCGCGT TTGTCAGCCT GCCACAGGAT ATCATCAATG AACCGGTGAG TAGCCCGGTG
CTGGCTTGTC CGAATTTACC GCTGTTAAAC GGTGCGCCAC ATAGTGACGT TGCCGAGGCG
GCTAAACGAC TGCGGGAGGC TAAAAATCCG GTGTTACTGC TTGGATTAAT GGCGAGCCAG
CAGGAGAATG CAGAGGCGCT GCGTCGTTTT TTACACCGCA GCCAACTGCC GGTTACCAGC
ACGTACCAGG CCGCTGGCGT GATCGACCAG CAGCAGTTTG GTCACTTTGC CGGACGTGTC
GGATTGTTCA ATAATCAGGC TGGGGATAAG CTGCTGCAAC AGGCGGACGT GATCGTTACC
GTAGGCTATA GCCCGATTGA GTACGATCCA GTGTTATGGA ATAGCGGCAA AGCAACGCTG
ATCCATATTG ATGTGCTGCG GGCTGAGATC GACAGCGCCT ACCACCCTGA TATCGAGCTG
CTCGGGAATA TCGCGATGAC GGTGGATGCG TTGAATGCAT GTATGAGCGA GCCCGTTATC
TTATCGGCGA GCACGCAGGC CGTATTGCAG GATCGCCAGC GTCAGCGTCA CGATCTCAGT
ACGCGCGCCA TCAATATGGC AGGATTTGCA ATTCACCCGC TGCGTCTGGT GCGGGCGATG
CAGGATATCG TGAATGAAGA TGTCACGCTG TGTGTGGACA TGGGAAGTTT TCATATCTGG
CTGGCGCGTT ATCTGTATAG CTTCCGGGCG CGGCAGATTC TGATGACCAA TGGCCAGCAG
ACCATGGGCG TGGCACTACC CTGGGCGATA GCCGCATCAT TGATACAGCC CGGCAAAAAA
GTGGTGTCCG TTTCCGGCGA CGGTGGGTTT ATGCAGTCCA GCATGGAGCT GGAAACGGCG
GTGCGCCTGA AAAGCAATCT CCTGCATATT ATCTGGGTGG ATAACGGCTA TAACATGGTG
GAAATCCAGC AAATCCATAA ATACCATCGT CCGGCGGGTG TGACATTTGG CCCGATTGAT
TTCAAGGCGT ATGCGGAAGC GTTTGGCGCA AAAGGGTTTG CAGTTGAATC TGCGGATGAA
CTGGTTAGCA AACTCCGTCA GGCGATGGAT GTTGACGGCC CCGCAGTGAT TGCGATTCCG
GTTGATTATT CCGATAACCA CTGGCTGATG GGGAATCTGA ATATTAGCGT TCTGATCTGA
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| Protein sequence | MEKSTEQQSW SCGAELIVKH LEAQGVKHIF GIPGAKIDRV FDELEDSTIQ TIPVRHEANG
AFMAAAIGRL TGKAGVTLVT SGPGCSNLVT GLATATAEGD AVVALGGAVK RADKLKLTHQ
SLDTVSLFQP VSKFSAEVTA SSAISEVLAN AFRAAESGRP GGAFVSLPQD IINEPVSSPV
LACPNLPLLN GAPHSDVAEA AKRLREAKNP VLLLGLMASQ QENAEALRRF LHRSQLPVTS
TYQAAGVIDQ QQFGHFAGRV GLFNNQAGDK LLQQADVIVT VGYSPIEYDP VLWNSGKATL
IHIDVLRAEI DSAYHPDIEL LGNIAMTVDA LNACMSEPVI LSASTQAVLQ DRQRQRHDLS
TRAINMAGFA IHPLRLVRAM QDIVNEDVTL CVDMGSFHIW LARYLYSFRA RQILMTNGQQ
TMGVALPWAI AASLIQPGKK VVSVSGDGGF MQSSMELETA VRLKSNLLHI IWVDNGYNMV
EIQQIHKYHR PAGVTFGPID FKAYAEAFGA KGFAVESADE LVSKLRQAMD VDGPAVIAIP
VDYSDNHWLM GNLNISVLI
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