Gene PC1_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0613 
SymbolrsmC 
ID8131533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp712582 
End bp713628 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content58% 
IMG OID644863894 
Product16S ribosomal RNA m2G1207 methyltransferase 
Protein accessionYP_003016204 
Protein GI253687014 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCAT TAACCCCCGC CAGTGAAGTT ATACTGCGCC ATAGCGATGA ATTTCTCTCA 
CGCCGCGTTC TGTTTGCCGG TGATTTGCAG GATACCCTGC CTGCGCAATT TGAGGCGGCG
TCAGTGCGTG TCCATTGCAA CCAATATCAC CACTGGCAGC AGATGACAAA GCCGCTTGGC
GAGAATGCGC AATTCGGTCT GGTGGCGGAT GCGGCGCTGG TGGCGGATAG CGACACGCTG
ATTTATTACT GGCCGAAAAG CAAACAGGAA GCGGAATTCC AGCTGCGTAA TCTGTTGTCC
CTGCTGCCGG TCGGCGCGGA GATCTTCGTG GTTGGGGAAA ACCGCAGCGG CGTGCGCAGC
GCCGAAACCG TGCTGTCTGA CTTCGTTGAA CTGGTGAAAA TCGACAGTGC GCGTCGCTGT
GGGCTTTACC ACGGTCGAAT TGATAAGCAG TCCAGCTTCA CGCTGGATGA CTGGTGGGAT
GAGTATGTGA CGGATGGCGT GATCGTCAAA ACACTTCCGG GCGTCTTCAG CCGTGATGAT
CTGGATCCGG GTAGCCGACT GCTGCTGTCT ACGTTTGAGC CGCACATGAA AGGCAAAGTG
CTGGATATCG CCTGCGGTGC GGGCGTGCTG GCATCGGTAC TGGCGAAACA GTCGCCGAAA
ATCCGCCTGA CGTTGAGCGA TGTCAGCGCG GCGGCGGTGG AGTCCAGCAA AGCTACGCTG
ACGGCGAATG CGTTGGAAGG CGAGGTGATT GCGAGCAACG TCTATTCCGA CATTAATGGC
CGCTTCGATA TGATCGTCTC CAATCCGCCA TTCCACGACG GCTTACAGAC CAGTCTGCAA
GCCGCGGAAA TGTTGATTCG TGGCGCGGTG ACCCATCTGC CGATTGGCGG GCAGTTGCGC
ATCGTCGCTA ATGCCTTCCT GCCGTATCCC GCGCTGTTAG ATGCCGCATT CGGTAGCCAT
GAAGTGCTGG CGCAGACCGG GCGCTTCAAG GTGTATCAGG CCACCGTGGG TCGTCCGCCG
CGCACAGGCA GTAAAGGTCG TCGGTAA
 
Protein sequence
MSALTPASEV ILRHSDEFLS RRVLFAGDLQ DTLPAQFEAA SVRVHCNQYH HWQQMTKPLG 
ENAQFGLVAD AALVADSDTL IYYWPKSKQE AEFQLRNLLS LLPVGAEIFV VGENRSGVRS
AETVLSDFVE LVKIDSARRC GLYHGRIDKQ SSFTLDDWWD EYVTDGVIVK TLPGVFSRDD
LDPGSRLLLS TFEPHMKGKV LDIACGAGVL ASVLAKQSPK IRLTLSDVSA AAVESSKATL
TANALEGEVI ASNVYSDING RFDMIVSNPP FHDGLQTSLQ AAEMLIRGAV THLPIGGQLR
IVANAFLPYP ALLDAAFGSH EVLAQTGRFK VYQATVGRPP RTGSKGRR