Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0613 |
Symbol | rsmC |
ID | 8131533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 712582 |
End bp | 713628 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644863894 |
Product | 16S ribosomal RNA m2G1207 methyltransferase |
Protein accession | YP_003016204 |
Protein GI | 253687014 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCAT TAACCCCCGC CAGTGAAGTT ATACTGCGCC ATAGCGATGA ATTTCTCTCA CGCCGCGTTC TGTTTGCCGG TGATTTGCAG GATACCCTGC CTGCGCAATT TGAGGCGGCG TCAGTGCGTG TCCATTGCAA CCAATATCAC CACTGGCAGC AGATGACAAA GCCGCTTGGC GAGAATGCGC AATTCGGTCT GGTGGCGGAT GCGGCGCTGG TGGCGGATAG CGACACGCTG ATTTATTACT GGCCGAAAAG CAAACAGGAA GCGGAATTCC AGCTGCGTAA TCTGTTGTCC CTGCTGCCGG TCGGCGCGGA GATCTTCGTG GTTGGGGAAA ACCGCAGCGG CGTGCGCAGC GCCGAAACCG TGCTGTCTGA CTTCGTTGAA CTGGTGAAAA TCGACAGTGC GCGTCGCTGT GGGCTTTACC ACGGTCGAAT TGATAAGCAG TCCAGCTTCA CGCTGGATGA CTGGTGGGAT GAGTATGTGA CGGATGGCGT GATCGTCAAA ACACTTCCGG GCGTCTTCAG CCGTGATGAT CTGGATCCGG GTAGCCGACT GCTGCTGTCT ACGTTTGAGC CGCACATGAA AGGCAAAGTG CTGGATATCG CCTGCGGTGC GGGCGTGCTG GCATCGGTAC TGGCGAAACA GTCGCCGAAA ATCCGCCTGA CGTTGAGCGA TGTCAGCGCG GCGGCGGTGG AGTCCAGCAA AGCTACGCTG ACGGCGAATG CGTTGGAAGG CGAGGTGATT GCGAGCAACG TCTATTCCGA CATTAATGGC CGCTTCGATA TGATCGTCTC CAATCCGCCA TTCCACGACG GCTTACAGAC CAGTCTGCAA GCCGCGGAAA TGTTGATTCG TGGCGCGGTG ACCCATCTGC CGATTGGCGG GCAGTTGCGC ATCGTCGCTA ATGCCTTCCT GCCGTATCCC GCGCTGTTAG ATGCCGCATT CGGTAGCCAT GAAGTGCTGG CGCAGACCGG GCGCTTCAAG GTGTATCAGG CCACCGTGGG TCGTCCGCCG CGCACAGGCA GTAAAGGTCG TCGGTAA
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Protein sequence | MSALTPASEV ILRHSDEFLS RRVLFAGDLQ DTLPAQFEAA SVRVHCNQYH HWQQMTKPLG ENAQFGLVAD AALVADSDTL IYYWPKSKQE AEFQLRNLLS LLPVGAEIFV VGENRSGVRS AETVLSDFVE LVKIDSARRC GLYHGRIDKQ SSFTLDDWWD EYVTDGVIVK TLPGVFSRDD LDPGSRLLLS TFEPHMKGKV LDIACGAGVL ASVLAKQSPK IRLTLSDVSA AAVESSKATL TANALEGEVI ASNVYSDING RFDMIVSNPP FHDGLQTSLQ AAEMLIRGAV THLPIGGQLR IVANAFLPYP ALLDAAFGSH EVLAQTGRFK VYQATVGRPP RTGSKGRR
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