| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0610 |
|---|
| Symbol | |
|---|
| ID | 8131530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 710916 |
|---|
| End bp | 711395 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644863891 |
|---|
| Product | coagulation factor 5/8 type domain protein |
|---|
| Protein accession | YP_003016201 |
|---|
| Protein GI | 253687011 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT ACACTCTGGC TACGACGCTT CTGTGCGGCT TATTCTCTCT TTCCGCTTAC
GCGGTACAAA TAACGGCGGT GACAGCCTCC GCTTATGATT CAGACAAGGG CCACAAACCG
GCCAACATTG CCGATGGCGA CGTAAAAACG CGCTGGGCGG CAAATGGTGA GAGTTGGGTT
CAGTTAGAAC TGGATAAAGA GCAATCGGTT GAGAACTTTG TTCTTGTTCC TTTCAAAGCG
GACGAGCGCA AACTGAAATT CTCCGTCTCC TACTCCACCG ACGGTAAAAC CTGGAAAAAG
CTGGCTGACA ATCTGGTCAC CTCCAGCAAT GCCAAAGACG GTGAAAAATT CACTTTCCCT
GCCGTTAAAG CCAAATTCTT CAAACTGGAT ACGTTTGGTA CCGATGTGAA CAAATGGAGC
GCGATCAACG AGATCAGCTT TAACAGCGCC GCGCAGGTTC CTGCTCAGGC CATTAAGTAA
|
|---|
| Protein sequence | MKKYTLATTL LCGLFSLSAY AVQITAVTAS AYDSDKGHKP ANIADGDVKT RWAANGESWV
QLELDKEQSV ENFVLVPFKA DERKLKFSVS YSTDGKTWKK LADNLVTSSN AKDGEKFTFP
AVKAKFFKLD TFGTDVNKWS AINEISFNSA AQVPAQAIK
|
|---|
| |