Gene PC1_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0608 
Symbol 
ID8131528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp710083 
End bp710382 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content53% 
IMG OID644863889 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_003016199 
Protein GI253687009 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAT CGCTTGATCG TGAAACGTTG GCCCGCGTCG CACCGAAACT GGCCGAACTG 
AGCATAGACA CACTGTTTAA TGATATTTGG AAACGTGAAA CGCTTTCCCC GCGCGAGCGT
AGCCTGATCA CACTGGGTGC CCTGACGGCG CAAGGGCGCG TTCAGCAGCT TCCTTGGCAT
ATCAACTTCG CACAGCAAAA TGGGTTAACC CGTGAAGAAA TCGTTGAGGT TTTCACTCAT
CTGGCATTTT ACGCAGGCTG GCCAGCCGCA GTTTCCGCCC TCGGTTGTTT GGAGGAATAA
 
Protein sequence
MAKSLDRETL ARVAPKLAEL SIDTLFNDIW KRETLSPRER SLITLGALTA QGRVQQLPWH 
INFAQQNGLT REEIVEVFTH LAFYAGWPAA VSALGCLEE