| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0603 |
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| Symbol | |
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| ID | 8131523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 702948 |
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| End bp | 704738 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863884 |
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| Product | ABC transporter domain protein |
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| Protein accession | YP_003016194 |
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| Protein GI | 253687004 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCCA GCCTCTGCTG GCAGGTCATC GCTCACCCCA TTATGCAAAC GCTTAAACGC
TTTTATTCTC TGGTCGCACC TTTCTGGCTG ACTACACGCG CCACGCTGTT GTGGTTATTG
CTGTTGCTGA TTATGAGCCT GACGCTCTCC GTCGTGTGGA TCAGCGTGCA GTACAATAAC
TGGAGCAGGG ATTTTTACGA CGCGCTGGCC GACTACTTTC AGCACGCCTC CATCTACGAT
ATGGCGGTGC GCTATCTGGC CTATACGCTG CTGTTCGTGT TGGTGATCAT CTGCGGCAAC
TGGCTCAAGA AACAGCTGAT TATCCGCTGG CGCGATACCA TGACGCATCA GTATGAGCAG
GATTGGCTGC GCAATCACGC CCACTATCAG CTCAGTGCCG GGCTGGATAA CCCCGATCAG
CGTATCGCGG AAGATATTCG CCTGCTGATC GAACAAAGCC TCGAACTCCT GCTCTCGTTG
CTGAAAAATA CCGCCCGCTT TTTCTCTTTT ATCGCCATTC TATGGCAACT TTCCGGCGTT
CATACTTTCA CATTAAGCGG CTATACCATC ACGATACACG GCTATCTGGT GTGGATTGCC
CTCGCCTACG CCGCCCTCGC CAGCGTGGTC ACACATCGAC TGGGTCACCG CCTGCACAAA
CTGAATATTG AGCGTCAGCG GGCGGAGGCC GACTACCGCG CCACGCTGCT ACGGGTTCGG
GATAACAGCG AACAAATTGC GTTTTATCAG GGGAGTGACG CCGAGCAGCA GCGAATGCGG
CAACATTTCC TGCCCATCGT GCAAAACTGG CAGCGCCTAA TGGCGCGAGA ATTTCGGCTG
GAAAGCTTTA CTACCAGCTA TTTCCGTTTC AGCCTGATTA TTCCGGTGTT CGCTACTCTG
CCGCTGTTTC TTGCTCGTCA GGTAAGCCTC GGGGCGATTA TGCAGGCGCG ATCCGCCTTC
GGCTATGTGC TGGATGCCTT TGGCTGGTTC ATCGATGCCT ATCGTCAGTT GGTTCAATGG
TCTTCCACCA TTGAGCGACT GTGGGAATTC CAGCAGCGCT TGCGGCTGTT GCCTGCACCA
GAGACGCCAC GTCATGAAAG TCATGCCCTG TCTATCAACG CGCTATCCGT ACCGCGCCCT
GATGGTTCGC CGTATTTCGC CCCGCTGACG CTCACGCTTC AGGCTGGCGA ATGGGCGGCG
TTCAGCGCAG CCAGCGGCAC GGGAAAAACC ACGCTGCTGC GTGCGCTGGC GGGATTGTGG
CCTGTTTCAC AAGGAGACTG GCATTTCCCC GCTGGCCACA CGCTGTTTTT GCCGCAAAAA
GCCTATTTAC CGCAGGATAC GCTGCGTCAG GTACTGTGTT ATCCGCAGGC GCAGTTAGCC
GATATCGCAC AGCTGACCGC AGTGCTGGAA CAAACCGGGC TGGCCTCGCT GATTCCTCGT
CTGGACGACA CTGAAAATTG GAGCCGGGTG CTATCGGGCG GCGAACAACA GCGCCTGTCA
CTCGCCCGCG CGCTGCTGCT GCGCCCGACG CTGCTTTGTC TGGATGAAGC CACCAGCCAG
CTTGATGACG CGGCGGCGCT TCAGCTGTTA GATCACATCA GGACTGTGCT GCCACGCACT
ATCGTGTTAG CCGTCAGCCA TCAGCCTGCC GTACTGGCTT GTTTCACGCA TCAGATACGG
TTAACACCAC TCGCGCCAGA GAAGAAAATA CGCACGGAGA ACAACATTGT CGATCCTTCT
GTTACGGTGC CAGAGGCGGA TAGACAGCAG GTTTCTTACG GCAGGATATG A
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| Protein sequence | MPASLCWQVI AHPIMQTLKR FYSLVAPFWL TTRATLLWLL LLLIMSLTLS VVWISVQYNN
WSRDFYDALA DYFQHASIYD MAVRYLAYTL LFVLVIICGN WLKKQLIIRW RDTMTHQYEQ
DWLRNHAHYQ LSAGLDNPDQ RIAEDIRLLI EQSLELLLSL LKNTARFFSF IAILWQLSGV
HTFTLSGYTI TIHGYLVWIA LAYAALASVV THRLGHRLHK LNIERQRAEA DYRATLLRVR
DNSEQIAFYQ GSDAEQQRMR QHFLPIVQNW QRLMAREFRL ESFTTSYFRF SLIIPVFATL
PLFLARQVSL GAIMQARSAF GYVLDAFGWF IDAYRQLVQW SSTIERLWEF QQRLRLLPAP
ETPRHESHAL SINALSVPRP DGSPYFAPLT LTLQAGEWAA FSAASGTGKT TLLRALAGLW
PVSQGDWHFP AGHTLFLPQK AYLPQDTLRQ VLCYPQAQLA DIAQLTAVLE QTGLASLIPR
LDDTENWSRV LSGGEQQRLS LARALLLRPT LLCLDEATSQ LDDAAALQLL DHIRTVLPRT
IVLAVSHQPA VLACFTHQIR LTPLAPEKKI RTENNIVDPS VTVPEADRQQ VSYGRI
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