| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0602 |
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| Symbol | deoD |
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| ID | 8131522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 702176 |
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| End bp | 702895 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644863883 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_003016193 |
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| Protein GI | 253687003 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTACGC CACATATTAA TGCAGAAATG GGTGATTTCG CGGACGTTGT ACTGATGCCG
GGCGACCCGC TGCGCGCTAA GTACATTGCA GAAACCTTTC TGGAAAATGC CCGCGAAGTG
AATAACGTGC GTGGCATGCT GGGTTTCACC GGCACCTATA AAGGCCGTAA AATTTCGGTG
ATGGGTCACG GTATGGGGAT CCCCTCCTGC TCAATCTATG CGAAAGAACT GATCACCGAA
TTCGGCGTGA AGAAGATCAT TCGCGTGGGT TCCTGCGGTG CAGTACGTGA AGATGTTAAG
CTGCGCGACG TGGTGATCGG TATGGGCGCC TGTACGGATT CCAAAGTGAA CCGCATGCGT
TTCAAAGATC ACGACTACGC GGCGATTGCT GATTTCGATA TGGTACGCAA TGCGGTTGAT
GCGGCCAAAG CACGCGATGT TTCCGTCCGC GTAGGTAACA TCTTTTCCGC CGATCTGTTC
TACACGCCAG ATCCGCAGAT GTTCGACGTA ATGGAAAAAT ACGGCATTCT GGGTGTGGAA
ATGGAAGCGG CCGGTATCTA CGGCGTCGCG GCAGAGTTCG GTGCGAAAGC GCTGGCCATC
TGTACCGTTT CTGACCATAT TCGTACGGGT GCGCAGACTA CGTCAGAAGA GCGTCAAAAT
ACGTTTAACG AGATGATCGA AATCGCGCTG GAATCCGTTC TGCTGGGCGA TAACGAGTAA
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| Protein sequence | MATPHINAEM GDFADVVLMP GDPLRAKYIA ETFLENAREV NNVRGMLGFT GTYKGRKISV
MGHGMGIPSC SIYAKELITE FGVKKIIRVG SCGAVREDVK LRDVVIGMGA CTDSKVNRMR
FKDHDYAAIA DFDMVRNAVD AAKARDVSVR VGNIFSADLF YTPDPQMFDV MEKYGILGVE
MEAAGIYGVA AEFGAKALAI CTVSDHIRTG AQTTSEERQN TFNEMIEIAL ESVLLGDNE
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