| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0600 |
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| Symbol | deoA |
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| ID | 8131520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 699490 |
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| End bp | 700818 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644863881 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_003016191 |
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| Protein GI | 253687001 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTCTGA TTCAGGAAAT TATTCGTAAG AAGCGTGACG GAAAAGCGCT AAGCGAAGAA
GAGATCCGCT TCTTTATCAA CGGTATTCGT GACAATACCG TCTCTGAAGG CCAGATCGCG
GCACTGGCGA TGACCATTTA TTTTCATGAC ATGTCGATGG ATGAACGTGT GGCGCTGACG
CTGGCGATGC GTGATTCCGG TACGGTACTG GACTGGAAGA GTTTGAACCT GAACGGCCCG
CTGGTGGACA AACACTCTAC CGGCGGCGTG GGTGATGTCA CTTCGCTGAT GCTGGGGCCG
ATGGTCGCTG CCTGCGGGGG ATACGTTCCG ATGATTTCTG GGCGTGGCTT GGGACATACC
GGTGGCACGC TAGATAAGCT CGAAGCGATT CCGGGATTGG ATATCTTCCC GAACGATGAC
GATTTTCGTC GCATCATCCA GCAGGTCGGC GTCGCGATTA TTGGGCAGAC CTCCTCGCTG
GCTCCGGCGG ATAAGCGCTT TTACGCCACG CGTGACATTA CCGCCACGGT CGACTCCATC
CCGCTCATTA CCGCGTCGAT TCTGGCGAAG AAGCTGGCTG AAGGGCTGGA TGCGTTGGTG
ATGGACGTCA AAGTGGGGTC TGGGGCGTTT ATGCCGACCT ACGCGCTGTC CGAACAGCTG
GCGCAGGCGA TTGTCGGCGT AGCGAATAAC GCGGGATGCC GCACCAGTGC ACTGCTGACG
GACATGAATC AGGTGCTGGC TTCTAGCGCG GGTAATGCGC TGGAAGTGCG GGAAGCCGTA
CGTTTCCTGA CGGGAGAGAG CCGCAATCCG CGTCTGTATG ATGTTACTAT GGCGCTCTGT
GGCGAGATGC TACTGGCGGG TGGGCTGGCA AGTTCGGCAG ACGACGCGCA TTCACGCCTG
CAGGCGGTGT TGGATAACGG CAAAGCCGCT GAAGTCTTTG GTCGCATGGT GGCCGCACAG
CGCGGCCCAG GTGATTTTGT CGAACACTAC GATCGCTACC TGCCGGTGGC GACATTGAGT
AAGCCAGTGT TCGCGACGCG GGAAGGTATC GTGACGGCGA TGGACACCCG CGCGCTGGGC
ATGGCAGTCG TATCGCTGGG CGGCGGACGC CGTCAGGCTA CCGATACGAT CGATTACAGC
GTCGGTCTGG ATAGCATGAT CAGCCTGGGT GAGCGCGTTG ACGCGCAGCG CCCGCTGGCG
GTGATCCATG CCAATACGGA AGCGCAATGG CAGCAGGCGG CGAATGACGT TCGCGCCGCA
ATCCAACTGG GTGACACGGC ACCAGAAAAG ACCCCGATGG TCTATCGCCG GGTGAGCGCG
GAAGCGTGA
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| Protein sequence | MFLIQEIIRK KRDGKALSEE EIRFFINGIR DNTVSEGQIA ALAMTIYFHD MSMDERVALT
LAMRDSGTVL DWKSLNLNGP LVDKHSTGGV GDVTSLMLGP MVAACGGYVP MISGRGLGHT
GGTLDKLEAI PGLDIFPNDD DFRRIIQQVG VAIIGQTSSL APADKRFYAT RDITATVDSI
PLITASILAK KLAEGLDALV MDVKVGSGAF MPTYALSEQL AQAIVGVANN AGCRTSALLT
DMNQVLASSA GNALEVREAV RFLTGESRNP RLYDVTMALC GEMLLAGGLA SSADDAHSRL
QAVLDNGKAA EVFGRMVAAQ RGPGDFVEHY DRYLPVATLS KPVFATREGI VTAMDTRALG
MAVVSLGGGR RQATDTIDYS VGLDSMISLG ERVDAQRPLA VIHANTEAQW QQAANDVRAA
IQLGDTAPEK TPMVYRRVSA EA
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