| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0590 |
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| Symbol | |
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| ID | 8131510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 688481 |
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| End bp | 689365 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644863871 |
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| Product | lipoprotein NlpI |
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| Protein accession | YP_003016181 |
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| Protein GI | 253686991 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.573815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCTT TCTTGCGCTG GTGTTATGTT GCAACAGCAC TCATGCTGGC AGGATGCAGC
AACACGGATT GGCGTAAAGA CGCAGTATTG GCGATTCCGT TACAGCCTAC TTTACAGCAG
GAAGTGATTC TGGCGCGCAT GGAACAAATC CTTGCAAGCC GGGCATTAAC CGATGATGAG
CGAGCACAGC TATTATATGA GCGCGGAGTG CTGTATGATA GTCTCGGGTT ACGGGCATTG
GCGCGGAATG ATTTTTCACA AGCGCTGACG ATCCGCCCTG ATATTCCAGA AGTTTTTAAC
TATTTGGGTA TCTATTTAAC GCAGGCAGGC AATTTTGATG CTGCCTATGA AGCGTTTGAT
TCTGTACTAG AGCTTGATCC AACTTACAAT TACGCGCGTT TAAACCGGGG CATCGCTTTG
TATTACGGCG GTCGCTACCT GTTAGCGCAG GATGATCTGC TGGCGTTTTA TCGAGACGAT
CCGAATGATC CTTTCCGTTC GTTGTGGCTG TATCTTGTGG AGCGAGAAAT CAATCCAGAG
ACGGCCAAAG TTGCGTTGAA GAAACGCTAT GACGACGCCA AGAAAGGGCC TTGGGGATGG
AATATTGTCG AATTCTACCT GGGTGGTATC AGTGAAAAAA CACTGATGCA GCGTTTACAG
GAAGAAGCTA CGGATAACAC TTCGCTCGCT GAGCATCTCA GTGAAACTGA CTTCTATTTA
GGTAAGCACT ACCTAAGTCT GGGGGACAAG AACACCGCTT TGGCGCTGTT CAAGCTGACG
GTTGCCAACA ACGTCCATAA CTTTGTTGAG CACCGCTATG CATTGTTGGA ATTGGCGCTA
TTAGGCCAAG AGCAAGACGA CCTATCAGGA TCGGACCAGC AATAG
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| Protein sequence | MKPFLRWCYV ATALMLAGCS NTDWRKDAVL AIPLQPTLQQ EVILARMEQI LASRALTDDE
RAQLLYERGV LYDSLGLRAL ARNDFSQALT IRPDIPEVFN YLGIYLTQAG NFDAAYEAFD
SVLELDPTYN YARLNRGIAL YYGGRYLLAQ DDLLAFYRDD PNDPFRSLWL YLVEREINPE
TAKVALKKRY DDAKKGPWGW NIVEFYLGGI SEKTLMQRLQ EEATDNTSLA EHLSETDFYL
GKHYLSLGDK NTALALFKLT VANNVHNFVE HRYALLELAL LGQEQDDLSG SDQQ
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