| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0589 |
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| Symbol | |
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| ID | 8131509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 686220 |
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| End bp | 688340 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644863870 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_003016180 |
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| Protein GI | 253686990 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.119802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGAATC CGATCGTTCG TAAGTTTCAA TATGGTCAGC ATACCGTTAC GTTAGAGACC
GGTATGATGG CTCGCCAGGC TACCGCCGCT GTGATGGTAA GCATGGATGA CACCGCGGTA
TTCGTTACCG TGGTCGGCGC GAAAAACGCC AAACCCGGCC AAAGTTTCTT CCCATTAACG
GTTAACTATC AGGAGCGTAC CTACGCTGCC GGACGTTTCC CAGGTGGTTT TTTCCGTCGT
GAAGGCCGTC CAAGCGAAGG CGAAACGCTG ATTTCTCGTC TGATCGACCG TCCAATCCGC
CCTCTGTTCC CAGAAGGTTT CCTGAATGAA GTTCAGGTGA TTGCGACCGT GGTTTCCGTT
AACCCACAGG TTAACCCTGA CATCGTTGCC ATGATTGGTG CCTCTGCGGC GCTGAGCCTG
TCTGGCATTC CGTTCAGCGG ACCTATCGGC GCTGCGCGTG TTGGTTACCT GAACGATCAG
TATGTTCTGA ACCCAACGAC AGATGAGCTG AAAGAAAGCC GTCTGGATCT GGTTGTTGCA
GGTACAGAAG GCGCGGTTCT GATGGTGGAA TCCGAAGCCG ACCTTCTGAG TGAAGATCAG
ATGCTGGGCG CAGTGGTATT TGGCCACGAT CAACAACAGG TTGTGATCGA AAACATCAAC
GCTCTGGTTG CCGAAGCGGG CAAACCGAAG TGGGACTGGC ATGCGCCAGA AGTGAATGTT
TCTTTAGAAC AGCGTGTACA GGCTCTGTCT GAAGCTCGTT TGGGTGACGC TTACCGCATC
ACTGAAAAAC AAGAGCGTTA TGCACAAGTT GACGTCATCA AAGCCGACGT TGAAGCTGCT
CTGCTGGCAG AAGATGAAAC GCTGAACGCG GGTGAGATCC AGGAAATTCT GGGCAACGTC
GAGAAAAACG TTGTGCGTAG CCGCGTTCTG GCTGGCGAAC CACGTATTGA TGGCCGTGAA
AAAGACATGA TTCGTGGTCT GGATGTGCGT ACTGGCGTAC TGCCGCGTAC CCACGGTTCT
GCACTGTTCA CCCGTGGTGA AACTCAGGCG TTGGTCACCG CGACGCTGGG TACCGAGCGT
GACGCACAGA CCATCGACGA ACTGACCGGC GAACGTACCG ATCGCTTCCT GCTGCACTAC
AACTTCCCTC CGTACTCTGT TGGTGAAACG GGTATGGTTG GTTCGCCTAA GCGTCGTGAA
ATTGGTCACG GTCGTCTGGC TAAGCGTGGC GTGTTGGCTG TTATGCCGAA GGCGAGCGAA
TTCCCGTACA CCGTCCGTGT AGTATCTGAA ATCACAGAAT CTAACGGTTC TTCCTCTATG
GCGTCTGTCT GCGGTGCGTC TCTGGCACTG ATGGACGCGG GTGTACCGAT TAAATCAGCC
GTTGCGGGTA TCGCGATGGG TCTGGTGAAA GAAGGCGACA ACTTTGTTGT GCTGTCCGAT
ATTCTGGGTG ACGAAGACCA CCTGGGCGAT ATGGACTTCA AAGTTGCCGG TAGCCGTGAA
GGTATTACCG CGCTGCAGAT GGATATCAAG ATCGAAGGGA TTACCCGTGA GATCATGCAG
GTTGCGTTGA ATCAGGCCAA AGGTGCGCGT TTGCACATTC TGGGCGTGAT GGAACAGGCA
ATCAGCACAC CACGTGGCGA TATCTCTGAA TTTGCACCAC GTATCCACAC CATCAAGATC
AGTACCGATA AGATCAAAGA TGTCATCGGT AAAGGTGGTT CTGTGATTCG TGCGCTGACC
GAAGAAACGG GTACCACCAT TGAAATCGAA GACGATGGTA CTGTGAAGAT CGCTTCAACT
GACGGCGAAA AAGCGAAACA CGCGATTCGT CGTATTGAAG AGATCACTGC TGAAATCGAA
GTTGGCCGCG TGTATCAGGG TAAAGTTACC CGCATCGTTG ACTTTGGTGC TTTCGTCGCC
ATCGGCGGCG GCAAAGAAGG CCTGGTGCAT ATTTCTCAGA TCGCCGATAA GCGCGTAGAG
AAAGTGACTG ACTACCTGCA AATGGGTCAG GAAGTACCGG TCAAGGTTCT GGAAGTTGAT
CGTCAGGGCC GCGTACGCTT AAGCATCAAA GAAGCAACAG CGCCAACTCA GGAAGCGGCA
GCCCCGTCTT CTGAGGAATA A
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| Protein sequence | MLNPIVRKFQ YGQHTVTLET GMMARQATAA VMVSMDDTAV FVTVVGAKNA KPGQSFFPLT
VNYQERTYAA GRFPGGFFRR EGRPSEGETL ISRLIDRPIR PLFPEGFLNE VQVIATVVSV
NPQVNPDIVA MIGASAALSL SGIPFSGPIG AARVGYLNDQ YVLNPTTDEL KESRLDLVVA
GTEGAVLMVE SEADLLSEDQ MLGAVVFGHD QQQVVIENIN ALVAEAGKPK WDWHAPEVNV
SLEQRVQALS EARLGDAYRI TEKQERYAQV DVIKADVEAA LLAEDETLNA GEIQEILGNV
EKNVVRSRVL AGEPRIDGRE KDMIRGLDVR TGVLPRTHGS ALFTRGETQA LVTATLGTER
DAQTIDELTG ERTDRFLLHY NFPPYSVGET GMVGSPKRRE IGHGRLAKRG VLAVMPKASE
FPYTVRVVSE ITESNGSSSM ASVCGASLAL MDAGVPIKSA VAGIAMGLVK EGDNFVVLSD
ILGDEDHLGD MDFKVAGSRE GITALQMDIK IEGITREIMQ VALNQAKGAR LHILGVMEQA
ISTPRGDISE FAPRIHTIKI STDKIKDVIG KGGSVIRALT EETGTTIEIE DDGTVKIAST
DGEKAKHAIR RIEEITAEIE VGRVYQGKVT RIVDFGAFVA IGGGKEGLVH ISQIADKRVE
KVTDYLQMGQ EVPVKVLEVD RQGRVRLSIK EATAPTQEAA APSSEE
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