| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0584 |
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| Symbol | nusA |
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| ID | 8131504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 679908 |
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| End bp | 681437 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644863865 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_003016175 |
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| Protein GI | 253686985 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAG AGATTCTGGC TGTTGTTGAA GCAGTTTCCA ATGAGAAAGC CGTCCCGCGC
GAGAAGATTT TTGAAGCGCT GGAAACCGCA CTGGCGACAG CGACCAAGAA AAAATACGAG
CAGGAAATTG ATGTCCGCGT CAGCATCGAT CGCAAAACAG GCGATTTTGA TACCTTCCGT
CGTTGGTTAG TGGTGAATGA AGTCACTCAG CCAACGCGCG AGATTACGCT TGAAGCCGCG
CAGTTCGAAG ATTCCTCTCT TGATGTTGGC GGTTACGTTG AAGATCAAAT TGAATCCGTA
ACCTTTGACC GCATTACGAC GCAAACGGCA AAACAGGTTA TCGTACAGAA AGTTCGTGAA
GCCGAACGTG CGATGGTTGT TGATCAATTC CGTGAGCAAG AAGGCGAGAT TATCACCGGT
GTCGTGAAGA AGGTGAACCG TGATAATATT TCGCTTGAAG TCAGACCAAT CGATGGCTCT
AACACCAGCG CAGAAGCGGT AATCGGCCGC GAAGATATGC TGCCTCGTGA GAATTTCCGC
CCTGGCGACC GTATTCGTGG CGTACTGTAT TCCGTTCGTC CTGAAGCTCG CGGTGCTCAA
CTGTTTGTCA GCCGTTCCCG TCCGGAAATG CTGGTTGAAC TCTTCCGCAT TGAAGTGCCA
GAAATCGGTG AAGAAGTTAT CGAGATTAAG GCTGCTGCCC GCGATCCGGG TTCACGTGCG
AAAATTGCAG TGAAGACGAA TGACAAGCGT ATCGATCCCG TCGGTGCTTG TGTTGGTATG
CGTGGCGCAC GCGTGCAGGC GGTTTCCAGC GAACTGGGCG GTGAGCGTAT TGACATCATT
CTGTGGGATG ACAACCCTGC ACAGTTTGTG ATCAATGCCA TGGCACCTGC CGATGTGGTA
TCGATCGTGG TTGATGAAGA TACCTGCACG ATGGATATCG CCGTTGAGTC GAGCAATCTG
GCTCAAGCGA TTGGTCGTAA CGGGCAAAAC GTACGTTTGG CTTCTCAACT GCTGAAACAG
CATCGTTCAG ACGACCGTTG GGAACTGAAC GTGATGACAG TGGAAGATCT TCAGGCCAAG
CATCAAGCTG AAGCACATGC TGCAATCGAC GTCTTTACCA AGCACCTTGA TATTGATGAC
GAGTTTGCCA CTGTGTTGGT TGAAGAAGGT TTCTCTTCAC TTGAAGAACT GGCCTACGTG
CCAATCAAGG AACTGCTGGC TATTGAAGGC CTTGATGAAG AAACCGTTGA AGCATTGCGT
GAGCGTGCTA AAGCCGCATT AACAACGCTG GCACTGGCGC ATGAAGAAAG CCTTGGTGAC
GGTCAACCTG CTGAAGACTT GCTTAGCTTG CCTGGGCTGT CGCGTGAGTT GGCGTTCAAG
CTTGCTGCGA TCGGTGTTTG TACGCTGGAA GATCTTGCTG AACAGGGCGT TGACGACCTG
ACAGATATTG AAGGGCTCAA TGATGAGCAA GCGGGCGAAT TGATTATGGC CGCACGTAAT
ATCTGTTGGT TTGGCGACGA CAACGAATAA
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| Protein sequence | MNKEILAVVE AVSNEKAVPR EKIFEALETA LATATKKKYE QEIDVRVSID RKTGDFDTFR
RWLVVNEVTQ PTREITLEAA QFEDSSLDVG GYVEDQIESV TFDRITTQTA KQVIVQKVRE
AERAMVVDQF REQEGEIITG VVKKVNRDNI SLEVRPIDGS NTSAEAVIGR EDMLPRENFR
PGDRIRGVLY SVRPEARGAQ LFVSRSRPEM LVELFRIEVP EIGEEVIEIK AAARDPGSRA
KIAVKTNDKR IDPVGACVGM RGARVQAVSS ELGGERIDII LWDDNPAQFV INAMAPADVV
SIVVDEDTCT MDIAVESSNL AQAIGRNGQN VRLASQLLKQ HRSDDRWELN VMTVEDLQAK
HQAEAHAAID VFTKHLDIDD EFATVLVEEG FSSLEELAYV PIKELLAIEG LDEETVEALR
ERAKAALTTL ALAHEESLGD GQPAEDLLSL PGLSRELAFK LAAIGVCTLE DLAEQGVDDL
TDIEGLNDEQ AGELIMAARN ICWFGDDNE
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