Gene PC1_0573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0573 
Symbol 
ID8131492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp664019 
End bp669520 
Gene Length5502 bp 
Protein Length1833 aa 
Translation table11 
GC content54% 
IMG OID644863853 
ProductKR domain protein 
Protein accessionYP_003016164 
Protein GI253686974 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3321] Polyketide synthase modules and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGC AAGAACAGTT CCGCGATAAG GATATTGCTA TTGTAGGAAT GTCGGCCCGC 
TTTCCCGGTG CGGAAGATAC CGCGATATTT TGGCAAAACC TGTTGGACGG CGTGGAGACG
ATCAGCACAT TCAGTGAAGA AGAACTGAGG GAGTCAGGCA TTGAAGAAGA GATGATCGCC
TCGCCCAACT ATATTCGCCG TCGGGGAATT TTGGGCAACG CACAGCACTT TGACGCTAAT
TTCTTTGATA TTACGCCGCG CGATGCCGAA ATTATGGACC CACAGCATCG TGTCTTTTTG
GAATGCTGCT GGCACGCATT TGAAGACGCA GGCTATGTAC CTGCCACCTA TCCCGGCAAA
GTTGGCATCT TCGGCGGAAC AGGAACCGCC TGGCATTTGA GTAAAGTGAA TGCCCATCCT
GAAGTACAGA AGTATGCCAG CGGCGCATCG GTCGTCACCA ACAATGATAA AGATTACGTA
ACGACCCGGG TTTCTTATAA GCTCAACCTC AAAGGGCCGA GTGTTAACGT ACAGACCGCC
TGTTCAACCG CGATGGTTGC CGTCGTGATG GGCATGAATA GCCTGTTGAA CGGGGAAAGC
GATCTGATCG TTGCAGGCGG TGTTTCCGTG GATACGCCAG AACGCCGGGG TTATCCTTAT
ATGCAAGGCG GCATGGAATC CGCAGATGGC CGCTGCTATG CCTTTGACTC CCGCGCCAAC
GGCACGGTGT TCAGCCGCGG TGCTGGCGTC GTGTTACTGA AGCGCCTGAA TGACGCTGTG
CGCGACGGCG ACCATATTTA CGCCGTGCTG AAAGGCGGCG CAGTGAATAA CGATGGTAAC
CTGAAAGCTG GTTTTACCGC GCCAAGCATC GACGGGCAGA TCGCCGTTGC CAAACAGGCC
ATCGCCAATG CGCAGCTTGA TCCCGCCACC ATCAATTTTG TTGAAGCACA CGGCACCGCG
ACGGCATTGG GCGACCCCAT CGAATTCACG TCGCTCACAC AAACGTTTCA GGAATATACA
GATAAAACCC AGTATTGCCG CCTGGGATCG GTGAAAACCA ACATCGGCCA TACGGACGCG
GCATCAGGCA TGGCCAGTCT CATTAAAGCC TCACTGGCGC TGGAAACCGG CAAGCTGCCA
GCCTCACTCC ATTTCGAATC ACCAAACCCT AACATTGAGT TTGAAACCAG CCCGTTCATC
ATGAACACCG AGCTCAGCGA GCTGGAACCG TCGGAGACAC CGCACCGCGC GCTGGTAAAC
TCTTTCGGCG TCGGCGGCAC CAATGCCTGC GTCATTCTGG AAGCGGCGCC ACCGCTCAAC
GCGGGCGATA CCCATAATGA CAGCCTGCTG GTTTTGCCTT TCTCCGCCAA AAGCCGCACG
GCGCTGGAAG ACATGAAACG CCGCCTGCGC GATTACCTCA GTGCGCATGA CGACGCCAAT
CTGGCAGATA TCGCCTACAC CCTACAGGTT GGGAGACAAA AGTTCTCGCA CAGCACGGCG
GTTATCGGGA AGGATCGTGA TTCTCTGTTG GCCAAACTGG ATCAGCCGTC ACTGGTAGTG
ACCCAACAGG GTAAAAGCAA AAAGTCTGTC GTGTTCATGT TCCCGGGACA GGGCAATCAG
TATGTCAACA TGGCGCGTGA ACTGTACGAT ACCTACGACG TCTTCCGCGC GAGCATGGAT
CAATGCTGTG ACTATCTGGA ACCGATTCTG GATGTCAATT TGACGTCAAT TATTTTTCAG
GACAGCGACA ATATCGCCGA GTCCCGTATC AATGAAACCC AGTTTACCCA ACCGTCCCTG
TTCGTGGTGG AGTACAGTCT GGCAAAACTG TGGATGTCGT GGGGCATTCA GCCAGATGTC
ATGATTGGGC ACAGCGTGGG GGAATACGTG GCAGCCTGCC TGTCCGGCGT ATTCTCACTG
GAAGATGCAC TGAAAGCCGT GGCGCTCCGG GGCAAAATGG TACAGGCATT GCCCGCAGGG
GATATGCTGG CTGTTCTGCT TGATGAGGAA AGCCTGAAGG CAAAACTTCA CGGCAGCAAG
CTGGAAATTG CAGCGGTTAA CTACCCTGGA CTCTGCGTCA TCGCCGGTGC TTCAAACGAT
ATCGCACGTT TCCAGCAGCA GTTGGAAGAC AGCAATATTT TCTGTAAACA TCTCGACACT
TCACACGCGT TCCACTCACA CATGATGGAA CCCATGCTGC CCGCCTTCAA AAAGGTCATC
GACAGCATCA AGCTCCATGC ACCACAGATC CCGTTTGTCT CTACCGTTAA CGGTGCTTGG
GTCACTGAAG AACTAGCGAA AAATAGCGAC TACTGGGTAC GTCACGTACG CAACCCGGTG
CTGTTCTCCC ACGCTTTCAA AACGCTGATG GCTGAAGAAC ATCATGACTT CGTGTTCCTT
GAAGTCGGCC CGGGGCGTTC ACTGGAATCG TCCGCCAAGC AGCATTTCAG CGCGGAAGAC
GGTGCCTTGA TTTATGCCTC ATTACCCACG GCAAAAGACG TTGCGTTGTC CGGCGAACAT
CTCCTCTCAA CACTTGGCGC ACTTTGGGCT AGCGGCGTAG ACGTTCCCTG GCATCTGCAT
CATTCAGAGC AGCATCGTCG CCGAATCCCG CTGCCGGGCT ACCCTTTTGA ACGCAAACGC
TTCGCCCTGC CAGCACTGTC GTCAGCCAGT CCTGACGCGC AGAGTGAACA ATCCGTTAAG
GCTAAGAAGC GGAAACAGGC CGATATCGGT GACTGGTTCT ATATGCCGAC CTGGAAAAAA
ACCATTCCAG CGAAATACAT GGCGGGCAAA CGCGTTGAAG CTGAGAACAC CTGCTGGCTG
ATCCTGACGG ATACACAGGG CATCGCCGAA CGCACGAAGC AGATACTGGA AAAGGACGGG
CATCAGGTCT TTTTCGTCAG CCCGGGAACG CAGTATCAGG AAACACTTTC CGAAGGCCGA
TACACTCTCA ACCCTGCCTC ACGCGCCGAC TATGTCCGGT TACTGAAAAG TCTGACGGAG
CAAGGGCTAC GTCCATCGCG TATCCTGTAT TTATGGAACC TGACGGCAGA GGAACAGGTA
CAGCCGCTTG AGCACACCTA TCTCTCGTCA CCGCTGAATA CATTCTATCC TGCCCTCTAT
CTCCAGCAGG CGCTGGTGAA TGAGAATTTG CTGGACGATC TGCATATCAC TTTTGCCACC
AGCAACACAT TCAGCGTCAT GGGCGAACGC ATCGCTTCCC CAGAGAATGC ACTGCTGGTA
GGACCTTCGC GCGTGTTCTA TCACGAATAC CCTGAGGTGC AATGCCATCT GGTAGATATC
GATCTCAAAC AAAACGCCGT ACAGCTTGAT GAATTTGCCC ATAGCCTGAT TGCAGAAAGC
CATATTGCAA CACACGGCAA TCTGGTGGCT TACCGCGGAA ACCAGCGCTG GGAAGAAAGC
TATCAGGCCG TCCATCTGAA GCAGGACGAT CTCGGTTTAC CTGCGGAATT GAAAGACGAC
GGCGTCTACC TCATCACAGG CGGCCTCGGT GGCTTGGGGA TCCTGCTTGC CAACCACCTG
TCAGAAAAAA GTCATGCGAC ACTCATCCTG ACCTACCGCG CCGCGCTACC GCCACGCGAA
GAGTGGCAAG CCTGGATCCA ACAGCATCCT GTTGACGATC CTGTCAGTGA AAAGCTGGCG
AGCATTTTAC GTCTGGAAGC CCGCGGCAAC CTGATACATC TGGCACAGGT CGACGTAAAT
GACTATCACG GTATGCGTGA CATGTTATCC GCATTCCCGC AGGTCGACGG GGTGTTCCAT
ACCGCAGGCG TGGCTGGCGG CGGCATCATT CCGCTGAAAA ATGACGCCGA TTGCGCCAAC
GTGCTCGATC CCAAAGTCGC AGGTTCGCTC ATTCTGGATG AATTGCTACA GGACAAACAG
CCTGACTTCT TTATTTTATT CTCTTCCATT ACCTCCATTG TCGGTGACGA AGCCCGCATT
GATTACTGCT CGGGTAACGC GTTTATGGAT GCCTTTGCGC ATTACCGCAA CCAGCATCGC
CGCGGACGCA CTGTCTCGCT GAACTGGGGA AAATGGGGCG ATGTGGGCAT GGCTGTCCGT
TGGGGCAAGC AGTTACAGGA GAAGAAAAAC AGCAAACTGG CGGCTGTTGA GGAAACCAAA
GGCGACCTGC TTACATACCT TGAGCGCGAA GGCATGCAGG AAAGCTATCA GGTTAATCTC
ACCGTGCAAG ACTGGGTCAT CGATGAACAC CGCCTCGCGA AGCAGCCTTC ACTGGTGGGA
GCGACGATTT TATCGCTGCT GCATGAGTTC ATGACGTGCT TTAAGCCTCA GGAAAGCCTG
CAGGTCAAAA ACCTGATGCT GACCAAGCCC GTTATCTATA CCGATGCCTG GCCACGACAG
ATGAAGCTAT TCATTACTCC AGATGGCAAA GGTTATAAGT TCAGCCTCAA GAGCCGAGGC
GTGCTTGAAC TCGCATGGCA AGAGCATGCA TTCGGGGGAA TCGGCAACGG TGCGCCAGCT
TCCGATCTCA CGCCACAATC GATTGACGCC ATTAAACAGC GCTGCACTAC GCAGGTGCCC
TACGCGCCGT TTCTCACTGA GCTGGACAAT GCCAACACGG GCGAAAATTT CCTGTCGTTC
AGCCAGCGCT GGAACAACCA CCGCGAGATC GTTCAGGGCA ATAACGAATG GCTGATACAC
AAGGTGCTGG GGAACGAATA TACGCACGAT CTTACCCGCT ACCCGTACCA TCCAGCGCTG
ATTGATGCCA CGGCAATATC CTGCCTGTCA TTGATTACAC AGGAGAATTT CCTGCCTATT
AGCTATGGCA AGATGACCTT CCTATCTCCA CTGGAAACAG AGTGCTACGT CCACGCCAGG
CTCAAGCAAG CCTATCAGCC GCAGGACAAC GCCATCGTCA TGGATATCAC GTTCCTTTCA
CCGGCGGGCG TTCCGCTGCT GGTCCTGGAA AACTACACGC TGATGAAGAT GACGATGGGC
AATCAGCTAG CAACGCCAGA GAACACCACT GCGGCAACCG CAGCCACGGT AAAAGTGAAT
CTGGCAGATA AAGACATTCT GTTGCCAGAA GGGGTGGATG CCATAAAACG CCAGCTCGCA
CATCTGGAAT TTGAACAGTT AGTCGTCGTC ACCAGCGATC TGGACCAGCT CATTTATGAG
TCAATCCCTG AGCAGGAAAC GCCTGAATTC ATCTTGCAGG ATAGCGAAGC TACGGAAGGG
TATGCCAGAC CCGCCCTCTC TGTGGATTAC GTTGCGCCAG AAAATGACAT TGAGAAAGAG
ATCGTCAAAG TCTGGCAGTC CATTCTGGGG ATCTCGGGTA TCGGCGTTAA TGACAGCTTT
ACTGAACTGG GCGGTAACTC ACTGCTGGCA GTACAGGTCG TTTCTACCGT TTCCGGCATA
TTTGAAATCG ATATTCGCGT TGATCTGTTT TACCAAAACC AGACCGTGCA AGGGTTAGCA
ACGCTGATCC TTACCGAACT GGAAGCCTTA TTGCAGGAAT AA
 
Protein sequence
MKQQEQFRDK DIAIVGMSAR FPGAEDTAIF WQNLLDGVET ISTFSEEELR ESGIEEEMIA 
SPNYIRRRGI LGNAQHFDAN FFDITPRDAE IMDPQHRVFL ECCWHAFEDA GYVPATYPGK
VGIFGGTGTA WHLSKVNAHP EVQKYASGAS VVTNNDKDYV TTRVSYKLNL KGPSVNVQTA
CSTAMVAVVM GMNSLLNGES DLIVAGGVSV DTPERRGYPY MQGGMESADG RCYAFDSRAN
GTVFSRGAGV VLLKRLNDAV RDGDHIYAVL KGGAVNNDGN LKAGFTAPSI DGQIAVAKQA
IANAQLDPAT INFVEAHGTA TALGDPIEFT SLTQTFQEYT DKTQYCRLGS VKTNIGHTDA
ASGMASLIKA SLALETGKLP ASLHFESPNP NIEFETSPFI MNTELSELEP SETPHRALVN
SFGVGGTNAC VILEAAPPLN AGDTHNDSLL VLPFSAKSRT ALEDMKRRLR DYLSAHDDAN
LADIAYTLQV GRQKFSHSTA VIGKDRDSLL AKLDQPSLVV TQQGKSKKSV VFMFPGQGNQ
YVNMARELYD TYDVFRASMD QCCDYLEPIL DVNLTSIIFQ DSDNIAESRI NETQFTQPSL
FVVEYSLAKL WMSWGIQPDV MIGHSVGEYV AACLSGVFSL EDALKAVALR GKMVQALPAG
DMLAVLLDEE SLKAKLHGSK LEIAAVNYPG LCVIAGASND IARFQQQLED SNIFCKHLDT
SHAFHSHMME PMLPAFKKVI DSIKLHAPQI PFVSTVNGAW VTEELAKNSD YWVRHVRNPV
LFSHAFKTLM AEEHHDFVFL EVGPGRSLES SAKQHFSAED GALIYASLPT AKDVALSGEH
LLSTLGALWA SGVDVPWHLH HSEQHRRRIP LPGYPFERKR FALPALSSAS PDAQSEQSVK
AKKRKQADIG DWFYMPTWKK TIPAKYMAGK RVEAENTCWL ILTDTQGIAE RTKQILEKDG
HQVFFVSPGT QYQETLSEGR YTLNPASRAD YVRLLKSLTE QGLRPSRILY LWNLTAEEQV
QPLEHTYLSS PLNTFYPALY LQQALVNENL LDDLHITFAT SNTFSVMGER IASPENALLV
GPSRVFYHEY PEVQCHLVDI DLKQNAVQLD EFAHSLIAES HIATHGNLVA YRGNQRWEES
YQAVHLKQDD LGLPAELKDD GVYLITGGLG GLGILLANHL SEKSHATLIL TYRAALPPRE
EWQAWIQQHP VDDPVSEKLA SILRLEARGN LIHLAQVDVN DYHGMRDMLS AFPQVDGVFH
TAGVAGGGII PLKNDADCAN VLDPKVAGSL ILDELLQDKQ PDFFILFSSI TSIVGDEARI
DYCSGNAFMD AFAHYRNQHR RGRTVSLNWG KWGDVGMAVR WGKQLQEKKN SKLAAVEETK
GDLLTYLERE GMQESYQVNL TVQDWVIDEH RLAKQPSLVG ATILSLLHEF MTCFKPQESL
QVKNLMLTKP VIYTDAWPRQ MKLFITPDGK GYKFSLKSRG VLELAWQEHA FGGIGNGAPA
SDLTPQSIDA IKQRCTTQVP YAPFLTELDN ANTGENFLSF SQRWNNHREI VQGNNEWLIH
KVLGNEYTHD LTRYPYHPAL IDATAISCLS LITQENFLPI SYGKMTFLSP LETECYVHAR
LKQAYQPQDN AIVMDITFLS PAGVPLLVLE NYTLMKMTMG NQLATPENTT AATAATVKVN
LADKDILLPE GVDAIKRQLA HLEFEQLVVV TSDLDQLIYE SIPEQETPEF ILQDSEATEG
YARPALSVDY VAPENDIEKE IVKVWQSILG ISGIGVNDSF TELGGNSLLA VQVVSTVSGI
FEIDIRVDLF YQNQTVQGLA TLILTELEAL LQE