Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0573 |
Symbol | |
ID | 8131492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 664019 |
End bp | 669520 |
Gene Length | 5502 bp |
Protein Length | 1833 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644863853 |
Product | KR domain protein |
Protein accession | YP_003016164 |
Protein GI | 253686974 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGC AAGAACAGTT CCGCGATAAG GATATTGCTA TTGTAGGAAT GTCGGCCCGC TTTCCCGGTG CGGAAGATAC CGCGATATTT TGGCAAAACC TGTTGGACGG CGTGGAGACG ATCAGCACAT TCAGTGAAGA AGAACTGAGG GAGTCAGGCA TTGAAGAAGA GATGATCGCC TCGCCCAACT ATATTCGCCG TCGGGGAATT TTGGGCAACG CACAGCACTT TGACGCTAAT TTCTTTGATA TTACGCCGCG CGATGCCGAA ATTATGGACC CACAGCATCG TGTCTTTTTG GAATGCTGCT GGCACGCATT TGAAGACGCA GGCTATGTAC CTGCCACCTA TCCCGGCAAA GTTGGCATCT TCGGCGGAAC AGGAACCGCC TGGCATTTGA GTAAAGTGAA TGCCCATCCT GAAGTACAGA AGTATGCCAG CGGCGCATCG GTCGTCACCA ACAATGATAA AGATTACGTA ACGACCCGGG TTTCTTATAA GCTCAACCTC AAAGGGCCGA GTGTTAACGT ACAGACCGCC TGTTCAACCG CGATGGTTGC CGTCGTGATG GGCATGAATA GCCTGTTGAA CGGGGAAAGC GATCTGATCG TTGCAGGCGG TGTTTCCGTG GATACGCCAG AACGCCGGGG TTATCCTTAT ATGCAAGGCG GCATGGAATC CGCAGATGGC CGCTGCTATG CCTTTGACTC CCGCGCCAAC GGCACGGTGT TCAGCCGCGG TGCTGGCGTC GTGTTACTGA AGCGCCTGAA TGACGCTGTG CGCGACGGCG ACCATATTTA CGCCGTGCTG AAAGGCGGCG CAGTGAATAA CGATGGTAAC CTGAAAGCTG GTTTTACCGC GCCAAGCATC GACGGGCAGA TCGCCGTTGC CAAACAGGCC ATCGCCAATG CGCAGCTTGA TCCCGCCACC ATCAATTTTG TTGAAGCACA CGGCACCGCG ACGGCATTGG GCGACCCCAT CGAATTCACG TCGCTCACAC AAACGTTTCA GGAATATACA GATAAAACCC AGTATTGCCG CCTGGGATCG GTGAAAACCA ACATCGGCCA TACGGACGCG GCATCAGGCA TGGCCAGTCT CATTAAAGCC TCACTGGCGC TGGAAACCGG CAAGCTGCCA GCCTCACTCC ATTTCGAATC ACCAAACCCT AACATTGAGT TTGAAACCAG CCCGTTCATC ATGAACACCG AGCTCAGCGA GCTGGAACCG TCGGAGACAC CGCACCGCGC GCTGGTAAAC TCTTTCGGCG TCGGCGGCAC CAATGCCTGC GTCATTCTGG AAGCGGCGCC ACCGCTCAAC GCGGGCGATA CCCATAATGA CAGCCTGCTG GTTTTGCCTT TCTCCGCCAA AAGCCGCACG GCGCTGGAAG ACATGAAACG CCGCCTGCGC GATTACCTCA GTGCGCATGA CGACGCCAAT CTGGCAGATA TCGCCTACAC CCTACAGGTT GGGAGACAAA AGTTCTCGCA CAGCACGGCG GTTATCGGGA AGGATCGTGA TTCTCTGTTG GCCAAACTGG ATCAGCCGTC ACTGGTAGTG ACCCAACAGG GTAAAAGCAA AAAGTCTGTC GTGTTCATGT TCCCGGGACA GGGCAATCAG TATGTCAACA TGGCGCGTGA ACTGTACGAT ACCTACGACG TCTTCCGCGC GAGCATGGAT CAATGCTGTG ACTATCTGGA ACCGATTCTG GATGTCAATT TGACGTCAAT TATTTTTCAG GACAGCGACA ATATCGCCGA GTCCCGTATC AATGAAACCC AGTTTACCCA ACCGTCCCTG TTCGTGGTGG AGTACAGTCT GGCAAAACTG TGGATGTCGT GGGGCATTCA GCCAGATGTC ATGATTGGGC ACAGCGTGGG GGAATACGTG GCAGCCTGCC TGTCCGGCGT ATTCTCACTG GAAGATGCAC TGAAAGCCGT GGCGCTCCGG GGCAAAATGG TACAGGCATT GCCCGCAGGG GATATGCTGG CTGTTCTGCT TGATGAGGAA AGCCTGAAGG CAAAACTTCA CGGCAGCAAG CTGGAAATTG CAGCGGTTAA CTACCCTGGA CTCTGCGTCA TCGCCGGTGC TTCAAACGAT ATCGCACGTT TCCAGCAGCA GTTGGAAGAC AGCAATATTT TCTGTAAACA TCTCGACACT TCACACGCGT TCCACTCACA CATGATGGAA CCCATGCTGC CCGCCTTCAA AAAGGTCATC GACAGCATCA AGCTCCATGC ACCACAGATC CCGTTTGTCT CTACCGTTAA CGGTGCTTGG GTCACTGAAG AACTAGCGAA AAATAGCGAC TACTGGGTAC GTCACGTACG CAACCCGGTG CTGTTCTCCC ACGCTTTCAA AACGCTGATG GCTGAAGAAC ATCATGACTT CGTGTTCCTT GAAGTCGGCC CGGGGCGTTC ACTGGAATCG TCCGCCAAGC AGCATTTCAG CGCGGAAGAC GGTGCCTTGA TTTATGCCTC ATTACCCACG GCAAAAGACG TTGCGTTGTC CGGCGAACAT CTCCTCTCAA CACTTGGCGC ACTTTGGGCT AGCGGCGTAG ACGTTCCCTG GCATCTGCAT CATTCAGAGC AGCATCGTCG CCGAATCCCG CTGCCGGGCT ACCCTTTTGA ACGCAAACGC TTCGCCCTGC CAGCACTGTC GTCAGCCAGT CCTGACGCGC AGAGTGAACA ATCCGTTAAG GCTAAGAAGC GGAAACAGGC CGATATCGGT GACTGGTTCT ATATGCCGAC CTGGAAAAAA ACCATTCCAG CGAAATACAT GGCGGGCAAA CGCGTTGAAG CTGAGAACAC CTGCTGGCTG ATCCTGACGG ATACACAGGG CATCGCCGAA CGCACGAAGC AGATACTGGA AAAGGACGGG CATCAGGTCT TTTTCGTCAG CCCGGGAACG CAGTATCAGG AAACACTTTC CGAAGGCCGA TACACTCTCA ACCCTGCCTC ACGCGCCGAC TATGTCCGGT TACTGAAAAG TCTGACGGAG CAAGGGCTAC GTCCATCGCG TATCCTGTAT TTATGGAACC TGACGGCAGA GGAACAGGTA CAGCCGCTTG AGCACACCTA TCTCTCGTCA CCGCTGAATA CATTCTATCC TGCCCTCTAT CTCCAGCAGG CGCTGGTGAA TGAGAATTTG CTGGACGATC TGCATATCAC TTTTGCCACC AGCAACACAT TCAGCGTCAT GGGCGAACGC ATCGCTTCCC CAGAGAATGC ACTGCTGGTA GGACCTTCGC GCGTGTTCTA TCACGAATAC CCTGAGGTGC AATGCCATCT GGTAGATATC GATCTCAAAC AAAACGCCGT ACAGCTTGAT GAATTTGCCC ATAGCCTGAT TGCAGAAAGC CATATTGCAA CACACGGCAA TCTGGTGGCT TACCGCGGAA ACCAGCGCTG GGAAGAAAGC TATCAGGCCG TCCATCTGAA GCAGGACGAT CTCGGTTTAC CTGCGGAATT GAAAGACGAC GGCGTCTACC TCATCACAGG CGGCCTCGGT GGCTTGGGGA TCCTGCTTGC CAACCACCTG TCAGAAAAAA GTCATGCGAC ACTCATCCTG ACCTACCGCG CCGCGCTACC GCCACGCGAA GAGTGGCAAG CCTGGATCCA ACAGCATCCT GTTGACGATC CTGTCAGTGA AAAGCTGGCG AGCATTTTAC GTCTGGAAGC CCGCGGCAAC CTGATACATC TGGCACAGGT CGACGTAAAT GACTATCACG GTATGCGTGA CATGTTATCC GCATTCCCGC AGGTCGACGG GGTGTTCCAT ACCGCAGGCG TGGCTGGCGG CGGCATCATT CCGCTGAAAA ATGACGCCGA TTGCGCCAAC GTGCTCGATC CCAAAGTCGC AGGTTCGCTC ATTCTGGATG AATTGCTACA GGACAAACAG CCTGACTTCT TTATTTTATT CTCTTCCATT ACCTCCATTG TCGGTGACGA AGCCCGCATT GATTACTGCT CGGGTAACGC GTTTATGGAT GCCTTTGCGC ATTACCGCAA CCAGCATCGC CGCGGACGCA CTGTCTCGCT GAACTGGGGA AAATGGGGCG ATGTGGGCAT GGCTGTCCGT TGGGGCAAGC AGTTACAGGA GAAGAAAAAC AGCAAACTGG CGGCTGTTGA GGAAACCAAA GGCGACCTGC TTACATACCT TGAGCGCGAA GGCATGCAGG AAAGCTATCA GGTTAATCTC ACCGTGCAAG ACTGGGTCAT CGATGAACAC CGCCTCGCGA AGCAGCCTTC ACTGGTGGGA GCGACGATTT TATCGCTGCT GCATGAGTTC ATGACGTGCT TTAAGCCTCA GGAAAGCCTG CAGGTCAAAA ACCTGATGCT GACCAAGCCC GTTATCTATA CCGATGCCTG GCCACGACAG ATGAAGCTAT TCATTACTCC AGATGGCAAA GGTTATAAGT TCAGCCTCAA GAGCCGAGGC GTGCTTGAAC TCGCATGGCA AGAGCATGCA TTCGGGGGAA TCGGCAACGG TGCGCCAGCT TCCGATCTCA CGCCACAATC GATTGACGCC ATTAAACAGC GCTGCACTAC GCAGGTGCCC TACGCGCCGT TTCTCACTGA GCTGGACAAT GCCAACACGG GCGAAAATTT CCTGTCGTTC AGCCAGCGCT GGAACAACCA CCGCGAGATC GTTCAGGGCA ATAACGAATG GCTGATACAC AAGGTGCTGG GGAACGAATA TACGCACGAT CTTACCCGCT ACCCGTACCA TCCAGCGCTG ATTGATGCCA CGGCAATATC CTGCCTGTCA TTGATTACAC AGGAGAATTT CCTGCCTATT AGCTATGGCA AGATGACCTT CCTATCTCCA CTGGAAACAG AGTGCTACGT CCACGCCAGG CTCAAGCAAG CCTATCAGCC GCAGGACAAC GCCATCGTCA TGGATATCAC GTTCCTTTCA CCGGCGGGCG TTCCGCTGCT GGTCCTGGAA AACTACACGC TGATGAAGAT GACGATGGGC AATCAGCTAG CAACGCCAGA GAACACCACT GCGGCAACCG CAGCCACGGT AAAAGTGAAT CTGGCAGATA AAGACATTCT GTTGCCAGAA GGGGTGGATG CCATAAAACG CCAGCTCGCA CATCTGGAAT TTGAACAGTT AGTCGTCGTC ACCAGCGATC TGGACCAGCT CATTTATGAG TCAATCCCTG AGCAGGAAAC GCCTGAATTC ATCTTGCAGG ATAGCGAAGC TACGGAAGGG TATGCCAGAC CCGCCCTCTC TGTGGATTAC GTTGCGCCAG AAAATGACAT TGAGAAAGAG ATCGTCAAAG TCTGGCAGTC CATTCTGGGG ATCTCGGGTA TCGGCGTTAA TGACAGCTTT ACTGAACTGG GCGGTAACTC ACTGCTGGCA GTACAGGTCG TTTCTACCGT TTCCGGCATA TTTGAAATCG ATATTCGCGT TGATCTGTTT TACCAAAACC AGACCGTGCA AGGGTTAGCA ACGCTGATCC TTACCGAACT GGAAGCCTTA TTGCAGGAAT AA
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Protein sequence | MKQQEQFRDK DIAIVGMSAR FPGAEDTAIF WQNLLDGVET ISTFSEEELR ESGIEEEMIA SPNYIRRRGI LGNAQHFDAN FFDITPRDAE IMDPQHRVFL ECCWHAFEDA GYVPATYPGK VGIFGGTGTA WHLSKVNAHP EVQKYASGAS VVTNNDKDYV TTRVSYKLNL KGPSVNVQTA CSTAMVAVVM GMNSLLNGES DLIVAGGVSV DTPERRGYPY MQGGMESADG RCYAFDSRAN GTVFSRGAGV VLLKRLNDAV RDGDHIYAVL KGGAVNNDGN LKAGFTAPSI DGQIAVAKQA IANAQLDPAT INFVEAHGTA TALGDPIEFT SLTQTFQEYT DKTQYCRLGS VKTNIGHTDA ASGMASLIKA SLALETGKLP ASLHFESPNP NIEFETSPFI MNTELSELEP SETPHRALVN SFGVGGTNAC VILEAAPPLN AGDTHNDSLL VLPFSAKSRT ALEDMKRRLR DYLSAHDDAN LADIAYTLQV GRQKFSHSTA VIGKDRDSLL AKLDQPSLVV TQQGKSKKSV VFMFPGQGNQ YVNMARELYD TYDVFRASMD QCCDYLEPIL DVNLTSIIFQ DSDNIAESRI NETQFTQPSL FVVEYSLAKL WMSWGIQPDV MIGHSVGEYV AACLSGVFSL EDALKAVALR GKMVQALPAG DMLAVLLDEE SLKAKLHGSK LEIAAVNYPG LCVIAGASND IARFQQQLED SNIFCKHLDT SHAFHSHMME PMLPAFKKVI DSIKLHAPQI PFVSTVNGAW VTEELAKNSD YWVRHVRNPV LFSHAFKTLM AEEHHDFVFL EVGPGRSLES SAKQHFSAED GALIYASLPT AKDVALSGEH LLSTLGALWA SGVDVPWHLH HSEQHRRRIP LPGYPFERKR FALPALSSAS PDAQSEQSVK AKKRKQADIG DWFYMPTWKK TIPAKYMAGK RVEAENTCWL ILTDTQGIAE RTKQILEKDG HQVFFVSPGT QYQETLSEGR YTLNPASRAD YVRLLKSLTE QGLRPSRILY LWNLTAEEQV QPLEHTYLSS PLNTFYPALY LQQALVNENL LDDLHITFAT SNTFSVMGER IASPENALLV GPSRVFYHEY PEVQCHLVDI DLKQNAVQLD EFAHSLIAES HIATHGNLVA YRGNQRWEES YQAVHLKQDD LGLPAELKDD GVYLITGGLG GLGILLANHL SEKSHATLIL TYRAALPPRE EWQAWIQQHP VDDPVSEKLA SILRLEARGN LIHLAQVDVN DYHGMRDMLS AFPQVDGVFH TAGVAGGGII PLKNDADCAN VLDPKVAGSL ILDELLQDKQ PDFFILFSSI TSIVGDEARI DYCSGNAFMD AFAHYRNQHR RGRTVSLNWG KWGDVGMAVR WGKQLQEKKN SKLAAVEETK GDLLTYLERE GMQESYQVNL TVQDWVIDEH RLAKQPSLVG ATILSLLHEF MTCFKPQESL QVKNLMLTKP VIYTDAWPRQ MKLFITPDGK GYKFSLKSRG VLELAWQEHA FGGIGNGAPA SDLTPQSIDA IKQRCTTQVP YAPFLTELDN ANTGENFLSF SQRWNNHREI VQGNNEWLIH KVLGNEYTHD LTRYPYHPAL IDATAISCLS LITQENFLPI SYGKMTFLSP LETECYVHAR LKQAYQPQDN AIVMDITFLS PAGVPLLVLE NYTLMKMTMG NQLATPENTT AATAATVKVN LADKDILLPE GVDAIKRQLA HLEFEQLVVV TSDLDQLIYE SIPEQETPEF ILQDSEATEG YARPALSVDY VAPENDIEKE IVKVWQSILG ISGIGVNDSF TELGGNSLLA VQVVSTVSGI FEIDIRVDLF YQNQTVQGLA TLILTELEAL LQE
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