Gene PC1_0565 details

Gene Information

• Locus tag: PC1_0565
• Symbol: rrmJ
• ID: 8131483
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 652431
• End bp: 653060
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644863844
• Product: 23S rRNA methyltransferase J
• Protein accession: YP_003016156
• Protein GI: 253686966
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0293] 23S rRNA methylase
• TIGRFAM ID: [TIGR00438] cell division protein FtsJ

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000545308
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAATA AAAAGCGTTC TGCAAGTTCC AGTCGCTGGT TGCAGGAACA CTTTAGCGAT 
AAATATGTGC AGCAGGCTCA GAAAAAAGGG CTGCGCTCGC GTGCTTGGTT TAAACTTGAC 
GAAATACAGC AGAGCGACAA ACTGTTTAAA CCCGGGATGA CAGTTGTGGA TTTAGGCGCT 
GCACCTGGCG GTTGGTCACA GTATGTGGTC ACGCAAATCG GTGGAAATGG TCGAATTATC 
GCGTGCGATA TTTTACCGAT GGATCCGATT GTCGGCGTCG ACTTCCTGCA AGGGGACTTT 
CGTGATGAAC TGGTCCTCAA AGCCTTGCTC GAAAGGGTTG GCGATAGCAA AGTTCAGGTG 
GTGATGTCTG ACATGGCCCC TAACATGAGT GGTACACCAG CCGTTGATAT TCCGAAGTCG 
ATGTATCTGG TTGAATTAGC CCTTGGTATG TGTCGGGATG TATTAGCGCC AGGCGGAAGT 
TTCCTGGTGA AAGTGTTTCA GGGAGAAGGT TTTGATGAAT ACCTGCGGGA AATTCGCTCC 
CTGTTTACGA AGGTGAAAAT TCGTAAACCA GACGCCTCAC GTGCCCGGTC TCGTGAAGTG 
TATATTGTAG CGACAGGGCG CAAACTGTAG 

 

Protein sequence

MANKKRSASS SRWLQEHFSD KYVQQAQKKG LRSRAWFKLD EIQQSDKLFK PGMTVVDLGA 
APGGWSQYVV TQIGGNGRII ACDILPMDPI VGVDFLQGDF RDELVLKALL ERVGDSKVQV 
VMSDMAPNMS GTPAVDIPKS MYLVELALGM CRDVLAPGGS FLVKVFQGEG FDEYLREIRS 
LFTKVKIRKP DASRARSREV YIVATGRKL