Gene PC1_0563 details

Gene Information

• Locus tag: PC1_0563
• Symbol: greA
• ID: 8131481
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 651389
• End bp: 651865
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644863842
• Product: transcription elongation factor GreA
• Protein accession: YP_003016154
• Protein GI: 253686964
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00266162
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACAAT TTCCGATGAC CTTGCGTGGT GCTGAAAAAT TGCGCGAAGA GCTTGACCAC 
CTGAAATCTG TGCGTCGACC TGAAATTATT GCGGCCATTG CCGAAGCGCG TGAGCACGGC 
GATCTGAAAG AAAATGCAGA ATACCACGCC GCACGTGAGC AGCAGGGCTT TTGTGAAGGG 
CGCATTCAAG ACATTGAAGC TAAGCTGTCT AACGCACAGG TTATCGATGT CACGAAGATG 
ACGGCGAACG GTCGTGTTAT TTTTGGCGCC ACTGTGACTG TGATGAACCT GGATAACGAG 
GAAGAACAAA CCTACCGGAT CGTGGGTGAT GACGAGGCGG ATTTTAAGCA AAATCTGATC 
TCTGTAAATT CCCCGATTGC GCGCGGTCTG ATCGGCAAAG AAGAAGATGA CGTTGTGGTC 
ATTCGTACGC CGGGTGGCGA CGTGGAATAT GAGATCCTGA AGGTCGAATA TCTATAA 

 

Protein sequence

MKQFPMTLRG AEKLREELDH LKSVRRPEII AAIAEAREHG DLKENAEYHA AREQQGFCEG 
RIQDIEAKLS NAQVIDVTKM TANGRVIFGA TVTVMNLDNE EEQTYRIVGD DEADFKQNLI 
SVNSPIARGL IGKEEDDVVV IRTPGGDVEY EILKVEYL