| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0557 |
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| Symbol | |
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| ID | 8131475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 645315 |
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| End bp | 646286 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644863836 |
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| Product | octaprenyl diphosphate synthase |
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| Protein accession | YP_003016148 |
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| Protein GI | 253686958 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000813107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTAG AACAAATTAC AACATTAACC GCACAGGATA TGGCAGCTGT TAATAACGTC
ATTCTTGAAC AACTGAATTC CGACGTCGTT TTGATCAACC AGCTTGGGCA TTACATCATC
AGCGGCGGTG GAAAACGTAT ACGCCCAATG ATTGCTGTGC TAGCCGCCAG AGCCCTCGAC
TATAACGGTG ATAAACATGT CACTGTCGCC GCACTGATCG AATTTATCCA TACCGCAACG
CTATTGCATG ATGACGTGGT AGACGAATCC GATATGCGAC GGGGGAAAGC AACAGCCAAT
GCCGCCTTTG GCAATGCCGC GAGCGTGCTG GTTGGGGATT TCATCTATAC CCGCGCCTTC
CAGATGATGA CCAGCCTTGA ATCGTTACGC GTACTGGCGC TGATGTCAGA AGCGGTAAAC
GTAATTGCCG AAGGCGAAGT CTTGCAGTTA ATGAACTGCA ACGATCCGGA TATTACCGAA
GAAAGCTATA TGCGTGTCAT TTACAGTAAA ACGGCACGTT TATTTGAAGC CGCCGCGCAA
TCGTCATCCA TCCTTGCTGG CGCGACGCCA GAGCAAGAAA AAGCGCTTCA GGACTATGGC
CGCTATCTGG GCACCGCGTT CCAGTTAATT GACGACCTGC TTGATTACAG CGCAGACGGC
AAAACGCTAG GCAAAAACAC GGGGGATGAC CTCAATGAGG GTAAACCAAC GCTGCCGCTG
CTGCACGCCA TGCATAATGG TAATGCAGAA CAGAGTTCGC TGATTCGTAA GGCAATTGAA
GAAGGAAACG GGCGCCATCT TCTGGAACCT GTGCTTGCCG CCATGCAACA ATGTGGTTCG
CTTGATTACA CACGTCAGCG TGCAGAAGAA GAGGCAGATA AAGCGATTAG CGCATTGCAG
CAGTTGCCAG AAACGCCATA CCGTATTGCG CTCGAAGGCC TTGCCCACTT AGCCGTACAG
CGCGATTTCT AA
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| Protein sequence | MNLEQITTLT AQDMAAVNNV ILEQLNSDVV LINQLGHYII SGGGKRIRPM IAVLAARALD
YNGDKHVTVA ALIEFIHTAT LLHDDVVDES DMRRGKATAN AAFGNAASVL VGDFIYTRAF
QMMTSLESLR VLALMSEAVN VIAEGEVLQL MNCNDPDITE ESYMRVIYSK TARLFEAAAQ
SSSILAGATP EQEKALQDYG RYLGTAFQLI DDLLDYSADG KTLGKNTGDD LNEGKPTLPL
LHAMHNGNAE QSSLIRKAIE EGNGRHLLEP VLAAMQQCGS LDYTRQRAEE EADKAISALQ
QLPETPYRIA LEGLAHLAVQ RDF
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