| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0553 |
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| Symbol | |
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| ID | 8131471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 642762 |
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| End bp | 643700 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644863832 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_003016144 |
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| Protein GI | 253686954 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000757079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTG CAGTTCTCGG AGCAGCAGGT GGTATCGGTC AGGCACTCGC ACTCCTCCTC
AAAACCCAGC TTCCTTCAGG TTCAGAACTA TCCCTCTACG ATATCGCGCC AGTCACGCCA
GGTGTTGCCG TCGATCTGAG CCACATTCCT ACAGCAGTGA AGATCAAAGG CTATAGCGGT
GAAGATGCTA AACCTGCGCT TGCTGGCGCG GATATCGTGC TGATCTCTGC CGGTGTGGCA
CGTAAACCTG GTATGGATCG TTCCGATCTG TTCAACGTCA ATGCGGGCAT TGTGCGTAAT
CTGGTTGAGC AAATCGCGGT TACTTGCCCG AAAGCCTGTA TCGGTATTAT CACCAACCCA
GTGAACACCA CTGTTGCCAT TGCAGCAGAA GTGCTGAAAA AAGCCGGCGT GTATGACAAA
AACAAACTGT TCGGCGTTAC CACGCTGGAT ATCATCCGTT CCAACACGTT TGTCGCTGAA
CTGAAAGGCA AACAGCCGCA GGATATAAAT GTACCGGTTA TCGGCGGACA CTCTGGTGTG
ACGATTCTTC CATTGCTGTC TCAGGTTCCT GGTATCAGCT TCAGCGAGCA GGAAGTGGCC
GATCTGACCA AGCGTATTCA GAATGCCGGC ACCGAAGTTG TTGAAGCCAA AGCGGGTGGC
GGATCGGCAA CGCTGTCTAT GGGTCAGGCT GCTGCACGTT TTGGTCTGTC TCTGGTTCGT
GCGCTGCAAG GCGAAAGCGG TGTGGTGGAA TGTGCATACG TTGAAAGCGA TGGCAAACAT
GCCCGTTTCT TCGCTCAGCC GGTGCTGTTG GGCAAAGATG GCGTCGTAGA GCGTAAAGAC
ATCGGCACAT TAAGCGCTTT TGAGCAAAAC GCGCTTAGCA GCATGCTGGA TACGCTGAAG
CAGGATATTG AGTTAGGCGA GACGTTCATC AAGAATTAA
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| Protein sequence | MKVAVLGAAG GIGQALALLL KTQLPSGSEL SLYDIAPVTP GVAVDLSHIP TAVKIKGYSG
EDAKPALAGA DIVLISAGVA RKPGMDRSDL FNVNAGIVRN LVEQIAVTCP KACIGIITNP
VNTTVAIAAE VLKKAGVYDK NKLFGVTTLD IIRSNTFVAE LKGKQPQDIN VPVIGGHSGV
TILPLLSQVP GISFSEQEVA DLTKRIQNAG TEVVEAKAGG GSATLSMGQA AARFGLSLVR
ALQGESGVVE CAYVESDGKH ARFFAQPVLL GKDGVVERKD IGTLSAFEQN ALSSMLDTLK
QDIELGETFI KN
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