| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0534 |
|---|
| Symbol | |
|---|
| ID | 8131451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 617230 |
|---|
| End bp | 618183 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644863812 |
|---|
| Product | Integral membrane protein TerC |
|---|
| Protein accession | YP_003016125 |
|---|
| Protein GI | 253686935 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACTCCA TCGGCACGCC GTGGTTATGG GGCAGCTTCG CTGCCATTGT TATAGTGATG
CTGGCCATCG ACCTGCTCTA TCAAGGGCGC AAAGGGTCGA CAGTAATGAC GTTCAAACAG
GCTGCCGTCT GGTCTATCAT CTGGGTTACG CTCTCGCTGC TGTTCAACGC CGGTTTCTGG
TGGTATCTGG ACGGCACAAT GGGCCGCGAA GTAGCCAACG CCCAGTCGCT GGCCTTCCTG
ACCGGTTATT TGATCGAGAA AGCGCTTGCC GTCGATAACG TCTTCGTCTG GCTGATGCTC
TTCGGCTACT TCGCCGTTCC CCCGCAATAC CAACGCCGCG TGCTGATTTA CGGCGTGTTA
GGCGCCATCG TCCTCAGAAC GCTGATGGTG TTTGGCGGCA GCTGGCTGGT CACGCAGTTC
CAGTGGCTGC TCTACGTGTT CGGTGCGTTC CTGCTATTCA CCGGCCTTAA AATGGCGCTG
GCGAAAGAAG ATGATGGGGC GATCGGCGAC AAACCGCTGG TACGCTGGCT GCGTAGCCGT
TTGCGCATGA CGGATACCAT CGAGAACGAA AAGTTCTTCG TCCGTCGTAA CGGCATCCTG
TATGCCACGC CGCTGTTTCT GGTGCTGATT ATGGTTGAAA TCAGCGACGT GATTTTCGCC
GTAGACAGTA TCCCGGCTAT TTTTGCCGTC ACAACCGATC CCTTTATCGT GCTGACGTCG
AACCTGTTCG CCATTTTGGG ACTGCGTGCG ATGTACTTCC TGCTGGCTGG CGTAGCTGAA
CGCTTCTCTC TGTTGAAATA TGGTTTGGCC GTCATCCTGA TCTTTATTGG TACCAAGATG
ATGCTCATCG ACATTTTCCA TATTCCGGTG GCCATTTCTC TGGGCGTCGT TGCCAGTATT
CTGATCATCA CCATGCTGAT CAACGTCTGG GTAAACAAAC GCGCCGAGCG TTAA
|
|---|
| Protein sequence | MHSIGTPWLW GSFAAIVIVM LAIDLLYQGR KGSTVMTFKQ AAVWSIIWVT LSLLFNAGFW
WYLDGTMGRE VANAQSLAFL TGYLIEKALA VDNVFVWLML FGYFAVPPQY QRRVLIYGVL
GAIVLRTLMV FGGSWLVTQF QWLLYVFGAF LLFTGLKMAL AKEDDGAIGD KPLVRWLRSR
LRMTDTIENE KFFVRRNGIL YATPLFLVLI MVEISDVIFA VDSIPAIFAV TTDPFIVLTS
NLFAILGLRA MYFLLAGVAE RFSLLKYGLA VILIFIGTKM MLIDIFHIPV AISLGVVASI
LIITMLINVW VNKRAER
|
|---|
| |