Gene PC1_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0531 
Symbol 
ID8131448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp613502 
End bp614992 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content54% 
IMG OID644863809 
ProductAltronate dehydratase 
Protein accessionYP_003016122 
Protein GI253686932 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGTA TTATAAAAAT TCATTCTCTG GACAATGTGG CTGTCGCCCT GCGTGATGTT 
GAGCAAGGCG AAACGGTGTC GGTGGATAGC CATACAGTGA CACTTCAGCA ACCTGTCGTG
CGCGGACATA AGTTCGCGCT GGAAACCATC GCACCGGGAG AAATGATTAC CAAGTATGGC
CTGCCTATTG GCCATGCATT GGTGTCCATT GCTCCCGGAG AACATATTCA CTCCCAGAAC
GCGAAAACCA ACCTGAGCGA TCTGGATGAA TATCAGTACC AGCCTGAGTT TATCGACCTG
CCGCCGCAAA TGGGTGACCG GGACGTACAG CTCTATCGTC GTAAAAATGG CGATGTCGGT
ATCCGTAATG AACTGTGGAT TCTGCCAACC GTCGGTTGCG TGAACGGGAT TGCTCGCCAG
ATCCAGCAGC GTTTCCTGAA AGAAACCAAT GACGCGGAAG GTATCGACGG CGTTTATCTG
TTTAGTCATA CCTTCGGCTG TTCACAGCTC GGTCAGGATC ACGAAAACAC CCGTACGATG
CTGCAAAACA TGGTGCGTCA CCCGAATGCA GGGGCGGTGC TGGTGATCGG TCTGGGGTGT
GAGAACAATC AGGTTGATGC ATTCCGCACG ACGCTGGGCG GTTTTGATTC CGATCGTGTA
ACGTTCATGG TGTGCCAGCA GCAGGACGAT GAAGTCGAAG CCGGTCTGGA ACGTCTGCAT
ACGCTGTATG AGGCGATGCG CCATGACAAA CGCGAGCCGG GTAAGTTGAG CGAGCTGAAG
TTTGGTCTGG AATGCGGTGG CTCTGATGGG CTGTCCGGCA TTACTGCCAA CCCGCTGTTA
GGCCGTTTCT CCGACTATCT GATCGCCAAC GGCGGCACCA CAGTGCTGAC CGAAGTGCCG
GAAATGTTCG GTGCGGAGCG TATTCTGATG AGCCGCTGCC GTGACGAAGC CACGTTTGAG
AAAACCGTCC ACATGGTGAA CGATTTCAAA CAGTACTTCA TCGCGCACGA CCAGCCGATT
TACGAGAACC CATCGCCGGG TAACAAGGCG GGTGGGATCA CTACGCTGGA AGAGAAATCA
CTGGGCTGTA CGCAAAAAGC CGGACAGAGC AAAGTGGTGG ACGTACTGAA ATATGGTGAG
CGCTTACATA CTCCGGGGCT CAACTTGCTC AGTGCGCCGG GGAATGATGC TGTCGCAACC
AGCGCGCTGG CGGGTGCGGG TTGCCATATG GTGTTGTTCA GTACCGGACG AGGCACGCCT
TACGGCGGAT TCGTGCCTAC CGTAAAACTG GCGACCAACA GCGAACTGGC GAAGAAAAAA
CCGCACTGGA TCGATTTTGA TGCAGGGCGT CTGATCCACG ACATGCCGAT GGACGAACTG
CTGAGCCAGT TTGTCGAGCT GATTGTCGAG ATTGCTGACG GCAAGCGTAC GAAGAATGAA
GTGAACGACT TCCGTGAATT AGCCATATTT AAGAGCGGCG TGACGTTGTA A
 
Protein sequence
MQSIIKIHSL DNVAVALRDV EQGETVSVDS HTVTLQQPVV RGHKFALETI APGEMITKYG 
LPIGHALVSI APGEHIHSQN AKTNLSDLDE YQYQPEFIDL PPQMGDRDVQ LYRRKNGDVG
IRNELWILPT VGCVNGIARQ IQQRFLKETN DAEGIDGVYL FSHTFGCSQL GQDHENTRTM
LQNMVRHPNA GAVLVIGLGC ENNQVDAFRT TLGGFDSDRV TFMVCQQQDD EVEAGLERLH
TLYEAMRHDK REPGKLSELK FGLECGGSDG LSGITANPLL GRFSDYLIAN GGTTVLTEVP
EMFGAERILM SRCRDEATFE KTVHMVNDFK QYFIAHDQPI YENPSPGNKA GGITTLEEKS
LGCTQKAGQS KVVDVLKYGE RLHTPGLNLL SAPGNDAVAT SALAGAGCHM VLFSTGRGTP
YGGFVPTVKL ATNSELAKKK PHWIDFDAGR LIHDMPMDEL LSQFVELIVE IADGKRTKNE
VNDFRELAIF KSGVTL