Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0531 |
Symbol | |
ID | 8131448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 613502 |
End bp | 614992 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644863809 |
Product | Altronate dehydratase |
Protein accession | YP_003016122 |
Protein GI | 253686932 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2721] Altronate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGTA TTATAAAAAT TCATTCTCTG GACAATGTGG CTGTCGCCCT GCGTGATGTT GAGCAAGGCG AAACGGTGTC GGTGGATAGC CATACAGTGA CACTTCAGCA ACCTGTCGTG CGCGGACATA AGTTCGCGCT GGAAACCATC GCACCGGGAG AAATGATTAC CAAGTATGGC CTGCCTATTG GCCATGCATT GGTGTCCATT GCTCCCGGAG AACATATTCA CTCCCAGAAC GCGAAAACCA ACCTGAGCGA TCTGGATGAA TATCAGTACC AGCCTGAGTT TATCGACCTG CCGCCGCAAA TGGGTGACCG GGACGTACAG CTCTATCGTC GTAAAAATGG CGATGTCGGT ATCCGTAATG AACTGTGGAT TCTGCCAACC GTCGGTTGCG TGAACGGGAT TGCTCGCCAG ATCCAGCAGC GTTTCCTGAA AGAAACCAAT GACGCGGAAG GTATCGACGG CGTTTATCTG TTTAGTCATA CCTTCGGCTG TTCACAGCTC GGTCAGGATC ACGAAAACAC CCGTACGATG CTGCAAAACA TGGTGCGTCA CCCGAATGCA GGGGCGGTGC TGGTGATCGG TCTGGGGTGT GAGAACAATC AGGTTGATGC ATTCCGCACG ACGCTGGGCG GTTTTGATTC CGATCGTGTA ACGTTCATGG TGTGCCAGCA GCAGGACGAT GAAGTCGAAG CCGGTCTGGA ACGTCTGCAT ACGCTGTATG AGGCGATGCG CCATGACAAA CGCGAGCCGG GTAAGTTGAG CGAGCTGAAG TTTGGTCTGG AATGCGGTGG CTCTGATGGG CTGTCCGGCA TTACTGCCAA CCCGCTGTTA GGCCGTTTCT CCGACTATCT GATCGCCAAC GGCGGCACCA CAGTGCTGAC CGAAGTGCCG GAAATGTTCG GTGCGGAGCG TATTCTGATG AGCCGCTGCC GTGACGAAGC CACGTTTGAG AAAACCGTCC ACATGGTGAA CGATTTCAAA CAGTACTTCA TCGCGCACGA CCAGCCGATT TACGAGAACC CATCGCCGGG TAACAAGGCG GGTGGGATCA CTACGCTGGA AGAGAAATCA CTGGGCTGTA CGCAAAAAGC CGGACAGAGC AAAGTGGTGG ACGTACTGAA ATATGGTGAG CGCTTACATA CTCCGGGGCT CAACTTGCTC AGTGCGCCGG GGAATGATGC TGTCGCAACC AGCGCGCTGG CGGGTGCGGG TTGCCATATG GTGTTGTTCA GTACCGGACG AGGCACGCCT TACGGCGGAT TCGTGCCTAC CGTAAAACTG GCGACCAACA GCGAACTGGC GAAGAAAAAA CCGCACTGGA TCGATTTTGA TGCAGGGCGT CTGATCCACG ACATGCCGAT GGACGAACTG CTGAGCCAGT TTGTCGAGCT GATTGTCGAG ATTGCTGACG GCAAGCGTAC GAAGAATGAA GTGAACGACT TCCGTGAATT AGCCATATTT AAGAGCGGCG TGACGTTGTA A
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Protein sequence | MQSIIKIHSL DNVAVALRDV EQGETVSVDS HTVTLQQPVV RGHKFALETI APGEMITKYG LPIGHALVSI APGEHIHSQN AKTNLSDLDE YQYQPEFIDL PPQMGDRDVQ LYRRKNGDVG IRNELWILPT VGCVNGIARQ IQQRFLKETN DAEGIDGVYL FSHTFGCSQL GQDHENTRTM LQNMVRHPNA GAVLVIGLGC ENNQVDAFRT TLGGFDSDRV TFMVCQQQDD EVEAGLERLH TLYEAMRHDK REPGKLSELK FGLECGGSDG LSGITANPLL GRFSDYLIAN GGTTVLTEVP EMFGAERILM SRCRDEATFE KTVHMVNDFK QYFIAHDQPI YENPSPGNKA GGITTLEEKS LGCTQKAGQS KVVDVLKYGE RLHTPGLNLL SAPGNDAVAT SALAGAGCHM VLFSTGRGTP YGGFVPTVKL ATNSELAKKK PHWIDFDAGR LIHDMPMDEL LSQFVELIVE IADGKRTKNE VNDFRELAIF KSGVTL
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