| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0518 |
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| Symbol | |
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| ID | 8131435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 601850 |
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| End bp | 602746 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863796 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003016109 |
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| Protein GI | 253686919 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAG AACGAGCTTT GACGCTGGAA GCCTTGAGGG TTATGGATGC GATCGATCGT
CGCGGCAGCT TTGCCGCTGC GGCAGATGAG CTGGGTAGAG TGCCTTCGGC GCTGAGCTAC
ACCATGCAAA AACTGGAAGA AGAGTTAGAC GTGGTGTTGT TCGATCGTTC CGGGCATCGT
ACTAAATTCA CGAATGTCGG ACGAATGCTG CTGGAACGCG GACGTATTCT GCTGGAAGCG
GCGGATAAAC TCACTACGGA TGCCGAAGCG CTGGCGCGCG GTTGGGAAAC ACACCTGACG
ATTGTGACGG AAGCGCTTAT TCCGACTCAG CGGCTTTTTC CCTTAATCGA TAAACTGGCG
CTCAAAGCGA ATACGCAGGT ATCGATTCTG ACGGAAGTGC TGGCGGGAGC ATGGGAGCGT
CTTGAGCAAG GGCGTGCCGA TATCGTGATT GCGCCGGACA TGCATTTTCG TGCGTCTTCC
GAAATGAATA CCCGCAAGCT GTATACGATG AATAATGTGT ATGTCGCCAG CCCTGAGCAC
CCCATTCATC AGGAACCTGA GCCGCTGTCG GATGCGACCC GAGTGAAATA CCGTGGGATT
GCGGTGGCGG ACACGGCGCG TGAGCGCCCG GTACTGACCG TGCAACTGTT GGATAAACAG
CAGCGTCTGA CAGTGAGCTC TCTGGATGAT AAGCGGCGTG CGTTGTTGGC GGGATTAGGC
GTCGCGACCA TGCCTTATCC AATGGTGGCG CAAGATATTG CCGAGGGGCG TTTATTGGTC
GTTGGGCCGG AGCATCAAAT GGAAAGCCAG ATTATTATGG CGTGGCGGCG AGACAGCATG
GGCGAGGCGA AATCCTGGTT CCTGCGTGAA ATTCCGAAGC TGCTAAACCA GCCCTAA
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| Protein sequence | MAKERALTLE ALRVMDAIDR RGSFAAAADE LGRVPSALSY TMQKLEEELD VVLFDRSGHR
TKFTNVGRML LERGRILLEA ADKLTTDAEA LARGWETHLT IVTEALIPTQ RLFPLIDKLA
LKANTQVSIL TEVLAGAWER LEQGRADIVI APDMHFRASS EMNTRKLYTM NNVYVASPEH
PIHQEPEPLS DATRVKYRGI AVADTARERP VLTVQLLDKQ QRLTVSSLDD KRRALLAGLG
VATMPYPMVA QDIAEGRLLV VGPEHQMESQ IIMAWRRDSM GEAKSWFLRE IPKLLNQP
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