Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0518 |
Symbol | |
ID | 8131435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 601850 |
End bp | 602746 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644863796 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003016109 |
Protein GI | 253686919 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAG AACGAGCTTT GACGCTGGAA GCCTTGAGGG TTATGGATGC GATCGATCGT CGCGGCAGCT TTGCCGCTGC GGCAGATGAG CTGGGTAGAG TGCCTTCGGC GCTGAGCTAC ACCATGCAAA AACTGGAAGA AGAGTTAGAC GTGGTGTTGT TCGATCGTTC CGGGCATCGT ACTAAATTCA CGAATGTCGG ACGAATGCTG CTGGAACGCG GACGTATTCT GCTGGAAGCG GCGGATAAAC TCACTACGGA TGCCGAAGCG CTGGCGCGCG GTTGGGAAAC ACACCTGACG ATTGTGACGG AAGCGCTTAT TCCGACTCAG CGGCTTTTTC CCTTAATCGA TAAACTGGCG CTCAAAGCGA ATACGCAGGT ATCGATTCTG ACGGAAGTGC TGGCGGGAGC ATGGGAGCGT CTTGAGCAAG GGCGTGCCGA TATCGTGATT GCGCCGGACA TGCATTTTCG TGCGTCTTCC GAAATGAATA CCCGCAAGCT GTATACGATG AATAATGTGT ATGTCGCCAG CCCTGAGCAC CCCATTCATC AGGAACCTGA GCCGCTGTCG GATGCGACCC GAGTGAAATA CCGTGGGATT GCGGTGGCGG ACACGGCGCG TGAGCGCCCG GTACTGACCG TGCAACTGTT GGATAAACAG CAGCGTCTGA CAGTGAGCTC TCTGGATGAT AAGCGGCGTG CGTTGTTGGC GGGATTAGGC GTCGCGACCA TGCCTTATCC AATGGTGGCG CAAGATATTG CCGAGGGGCG TTTATTGGTC GTTGGGCCGG AGCATCAAAT GGAAAGCCAG ATTATTATGG CGTGGCGGCG AGACAGCATG GGCGAGGCGA AATCCTGGTT CCTGCGTGAA ATTCCGAAGC TGCTAAACCA GCCCTAA
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Protein sequence | MAKERALTLE ALRVMDAIDR RGSFAAAADE LGRVPSALSY TMQKLEEELD VVLFDRSGHR TKFTNVGRML LERGRILLEA ADKLTTDAEA LARGWETHLT IVTEALIPTQ RLFPLIDKLA LKANTQVSIL TEVLAGAWER LEQGRADIVI APDMHFRASS EMNTRKLYTM NNVYVASPEH PIHQEPEPLS DATRVKYRGI AVADTARERP VLTVQLLDKQ QRLTVSSLDD KRRALLAGLG VATMPYPMVA QDIAEGRLLV VGPEHQMESQ IIMAWRRDSM GEAKSWFLRE IPKLLNQP
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