Gene PC1_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0514 
Symbol 
ID8131431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp599012 
End bp599620 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content52% 
IMG OID644863792 
ProductLexA repressor 
Protein accessionYP_003016105 
Protein GI253686915 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAT TAACAGCAAG GCAGCAGCAG GTTTATGACC TGATCCGCGA TCACATTGCG 
CAGACCGGAA TGCCGCCAAC GCGCGCGGAA ATTGCTCAAC AGCTGGGGTT TCGCTCTCCG
AATGCGGCTG AAGAACATCT GAAAGCGCTG GCGCGTAAAG GTGTGATTGA AATTGTATCG
GGTGCTTCTC GCGGTATTCG TCTGCTGATG GAAGAAGAGA CGGGTATTCC TCTGGTTGGT
CGCGTGGCCG CAGGTGAGCC TCTGCTGGCG CAGGAACATA TCGAATGTCA CTATCAGGTT
GACCCCGCAA TGTTCAAACC CAGCGCTGAT TTTTTGCTGC GCGTGAGCGG CATGTCGATG
AAAGATATCG GGATTATGGA TGGCGATTTA CTGGCCGTGC ATAAAACGGA AGATGTACGC
AACGGTCAGA TTGTCGTCGC GCGCATTGAC GATGAAGTGA CGGTAAAACG CCTGAAAAAG
CAGGGCAATA TGGTGCACCT TCTCGCTGAA AACGAAGAGT TTGCCCCCAT TGTTGTTGAC
CTGCGTCAGC AGAGCTTTTC GATAGAAGGC TTAGCGGTTG GCGTGATTCG TAACAGCGAC
TGGAGCTAG
 
Protein sequence
MKVLTARQQQ VYDLIRDHIA QTGMPPTRAE IAQQLGFRSP NAAEEHLKAL ARKGVIEIVS 
GASRGIRLLM EEETGIPLVG RVAAGEPLLA QEHIECHYQV DPAMFKPSAD FLLRVSGMSM
KDIGIMDGDL LAVHKTEDVR NGQIVVARID DEVTVKRLKK QGNMVHLLAE NEEFAPIVVD
LRQQSFSIEG LAVGVIRNSD WS