Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0512 |
Symbol | |
ID | 8131429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 595815 |
End bp | 598283 |
Gene Length | 2469 bp |
Protein Length | 822 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644863790 |
Product | glycerol-3-phosphate acyltransferase |
Protein accession | YP_003016103 |
Protein GI | 253686913 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2937] Glycerol-3-phosphate O-acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGTT GGCGTAAAAT TTACTATAAA TTATTGAATC TCCCACTGAA ACTGCTGGTT AAAAGCAAAG TTATTCCCGC AGATCCCGTG GTCGAGTTGG GGTTAGATCC CTCACGTCCT ATACTCTATG TTCTGCCTTA TAACTCTCAG GCGGATCTCT TGACGCTACG CGCGAAATGC CTGGCATTGG GGTTACCCGA TCCCTCGCAA TCGTTCGAAT TCAACGGCGT CGAACTTCCC AGCCACGTCT TTATTAATGA CGGGCCGCGC GTCTTCCGCT ATTACGTTCC CAAGCAGAAA TCCGTCAAGC TGTTCCACGA CTATCTGGAC CTGCATCGCG CCAATCCAGA TTTAGACGTA CAGATGGTGC CGGTTTCCGT GATGTTTGGA CGTTCTCCGG GTCGGGAAGG CCATTCTCAG GCCACACCAC ACCTGCGATT GCTCAACGGC ATTGAGAAAT TCTTCGCTGT CCTGTGGCTA GGGCGTGACA GTTTTGTTCG CTTCTCCAGC CCGGTGTCGC TGCGCTATAT GGCGACCGAG CATGGCACTG ACAAAACCAT AGCCCACAAA CTGGCGCGCG TCGCGCGTAT GCACTTCTCC CGCCAGCGTT TGGCGGCAGT TGGCCCACGC TTGCCGGTAC GTCAGGAACT GTTTAATAAG CTGCTGGATT CGAAAGCGAT CAAGAAGGCC GTAGACGATG AGGCGCGCAG TAAGAAGATT TCCCATGAGA AAGCGCAGCA GAACGCCATT GCGTTGATGG AAGAAATCGC CGCCGACTTC TCCTACGAAG CCGTGCGTCT GTCGGATCGC GTCTTAAGCT GGACGTGGAA CCGCCTTTAT CAAGGGATCA ACGTCCATAA CGCCGAACGC GTTCGTCAGC TGGCACAGGA TGGTCATGGT ATTGTCTATG TGCCCTGCCA CCGCAGCCAT ATGGACTATC TGCTGCTGTC CTACGTCCTA TACCATCAGG GCCTAGTGCC GCCGCACATC GCCGCAGGCA TCAATCTTAA TTTCTGGCCA GCGGGTCCGA TCTTCCGTCG CCTTGGCGCC TTCTTCATTC GTCGTACCTT CAAAGGCAAT AAGCTGTATT CCACTATTTT CCGTGAGTAT CTGGGTGAAC TGTTTGCCCG TGGTTATTCG GTGGAATACT TCATGGAAGG CGGACGTTCA CGCACGGGTC GCCTGTTAGA GCCGAAAACC GGTACGCTGG CGATGACGAT TCAGGCCATG CTCAGAGGCG GTACGCGCCC TATCACGCTG GTGCCGATTT ATGTCGGCTA CGAGCATGTG ATGGAAGTCG GCACCTATGC GAAAGAGCTG CGCGGCGCGG TGAAGGAAAA AGAAGGCTTT ATGCAGATGG TGCGCGGTTT ACGCAAATTG CGTAATCTCG GCCAGGGGTA TGTGAACTTC GGTGAACCAC TCCCGCTGAC CACCTATCTG AATCAGCATG TTCCGCAATG GCGTGATGCG ATTGATCCTA TCGAAGCACA GCGCCCAAGT TGGCTAACGC CGACGGTGCA GGATATCTCG ATGGATATCA TGGTACGCAT CAATAATTCT GCGGCAGCAA ACGCGATGAA CCTGTGTTCT ACGGCTCTGT TGGCATCGCG CCAGCGCTCA CTGACGCGCG AGCAAATGCA AGAACAGCTG GATTGCTATC TGCAACTGCT GCGTCAGGTT CCTTATCACA AAGATATTAC GGTTCCCAAA AAGACAGCGG ATGAACTGTT GGAACATGCG CTGAGCATGA ACAAGTTCGA AGTCGAGAAG GACAGCATTG GCGATATCAT CATTCTGCCG CGCGAGCAGG CCGTTCTGAT GACGTACTAT CGCAATAACA TCCAGCATCT GTTGGTGTTA CCGTCGCTGA TTGCCAGCAT CGTCATCCAC CACCGTCGGA TTACGCTTGC AGAAGTCGTG CGCCAGATCG CGCTGATCTA TCCGCTGCTG CAATCCGAAC TGTTCCTGCA TTATTCCAAA GAGCAGTTAC CGGGCGTGCT GGAAACGTTG GCTAATGAAC TGGTTCAACA GCAGTTGTTG TGTAGTCGTG ACGGTGAGCT GGCGATCAAT CCGCCACGTA TCCGCACGCT GCAATTGCTG TCGGCAGGCG TGCGTGAAAC GCTGCAACGT TATGCGATTA CGCTGTCGTT GCTGTGTGCG AATCCAGAAA TCAACCGCGG AACGCTGGAA AAAGAAAGCC GGAACATGGC TCAACGCCTG TCCGTCCTGC ACGGCATCAA TGCGCCAGAG TTCTTTGATA AAGCGGTGTT CTCAACGCTG GTCGCAACCT TACGGACGGA AGGCTATATC ACCGACAGTG CGGAAGCGGC GCAAGGCGAT ATCGTGGCGA TCTACAACAT TCTCGGCGAT TTGATCACCC CAGAAGTGCG CTTGACCATT GAAAGCGCCA GCTCATCCGC TGAAATGGAA GCCGAAAGCC AGGCAGTGGA AGAGACAACG CAGGAGTAG
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Protein sequence | MSGWRKIYYK LLNLPLKLLV KSKVIPADPV VELGLDPSRP ILYVLPYNSQ ADLLTLRAKC LALGLPDPSQ SFEFNGVELP SHVFINDGPR VFRYYVPKQK SVKLFHDYLD LHRANPDLDV QMVPVSVMFG RSPGREGHSQ ATPHLRLLNG IEKFFAVLWL GRDSFVRFSS PVSLRYMATE HGTDKTIAHK LARVARMHFS RQRLAAVGPR LPVRQELFNK LLDSKAIKKA VDDEARSKKI SHEKAQQNAI ALMEEIAADF SYEAVRLSDR VLSWTWNRLY QGINVHNAER VRQLAQDGHG IVYVPCHRSH MDYLLLSYVL YHQGLVPPHI AAGINLNFWP AGPIFRRLGA FFIRRTFKGN KLYSTIFREY LGELFARGYS VEYFMEGGRS RTGRLLEPKT GTLAMTIQAM LRGGTRPITL VPIYVGYEHV MEVGTYAKEL RGAVKEKEGF MQMVRGLRKL RNLGQGYVNF GEPLPLTTYL NQHVPQWRDA IDPIEAQRPS WLTPTVQDIS MDIMVRINNS AAANAMNLCS TALLASRQRS LTREQMQEQL DCYLQLLRQV PYHKDITVPK KTADELLEHA LSMNKFEVEK DSIGDIIILP REQAVLMTYY RNNIQHLLVL PSLIASIVIH HRRITLAEVV RQIALIYPLL QSELFLHYSK EQLPGVLETL ANELVQQQLL CSRDGELAIN PPRIRTLQLL SAGVRETLQR YAITLSLLCA NPEINRGTLE KESRNMAQRL SVLHGINAPE FFDKAVFSTL VATLRTEGYI TDSAEAAQGD IVAIYNILGD LITPEVRLTI ESASSSAEME AESQAVEETT QE
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