Gene PC1_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0512 
Symbol 
ID8131429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp595815 
End bp598283 
Gene Length2469 bp 
Protein Length822 aa 
Translation table11 
GC content54% 
IMG OID644863790 
Productglycerol-3-phosphate acyltransferase 
Protein accessionYP_003016103 
Protein GI253686913 
COG category[I] Lipid transport and metabolism 
COG ID[COG2937] Glycerol-3-phosphate O-acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGTT GGCGTAAAAT TTACTATAAA TTATTGAATC TCCCACTGAA ACTGCTGGTT 
AAAAGCAAAG TTATTCCCGC AGATCCCGTG GTCGAGTTGG GGTTAGATCC CTCACGTCCT
ATACTCTATG TTCTGCCTTA TAACTCTCAG GCGGATCTCT TGACGCTACG CGCGAAATGC
CTGGCATTGG GGTTACCCGA TCCCTCGCAA TCGTTCGAAT TCAACGGCGT CGAACTTCCC
AGCCACGTCT TTATTAATGA CGGGCCGCGC GTCTTCCGCT ATTACGTTCC CAAGCAGAAA
TCCGTCAAGC TGTTCCACGA CTATCTGGAC CTGCATCGCG CCAATCCAGA TTTAGACGTA
CAGATGGTGC CGGTTTCCGT GATGTTTGGA CGTTCTCCGG GTCGGGAAGG CCATTCTCAG
GCCACACCAC ACCTGCGATT GCTCAACGGC ATTGAGAAAT TCTTCGCTGT CCTGTGGCTA
GGGCGTGACA GTTTTGTTCG CTTCTCCAGC CCGGTGTCGC TGCGCTATAT GGCGACCGAG
CATGGCACTG ACAAAACCAT AGCCCACAAA CTGGCGCGCG TCGCGCGTAT GCACTTCTCC
CGCCAGCGTT TGGCGGCAGT TGGCCCACGC TTGCCGGTAC GTCAGGAACT GTTTAATAAG
CTGCTGGATT CGAAAGCGAT CAAGAAGGCC GTAGACGATG AGGCGCGCAG TAAGAAGATT
TCCCATGAGA AAGCGCAGCA GAACGCCATT GCGTTGATGG AAGAAATCGC CGCCGACTTC
TCCTACGAAG CCGTGCGTCT GTCGGATCGC GTCTTAAGCT GGACGTGGAA CCGCCTTTAT
CAAGGGATCA ACGTCCATAA CGCCGAACGC GTTCGTCAGC TGGCACAGGA TGGTCATGGT
ATTGTCTATG TGCCCTGCCA CCGCAGCCAT ATGGACTATC TGCTGCTGTC CTACGTCCTA
TACCATCAGG GCCTAGTGCC GCCGCACATC GCCGCAGGCA TCAATCTTAA TTTCTGGCCA
GCGGGTCCGA TCTTCCGTCG CCTTGGCGCC TTCTTCATTC GTCGTACCTT CAAAGGCAAT
AAGCTGTATT CCACTATTTT CCGTGAGTAT CTGGGTGAAC TGTTTGCCCG TGGTTATTCG
GTGGAATACT TCATGGAAGG CGGACGTTCA CGCACGGGTC GCCTGTTAGA GCCGAAAACC
GGTACGCTGG CGATGACGAT TCAGGCCATG CTCAGAGGCG GTACGCGCCC TATCACGCTG
GTGCCGATTT ATGTCGGCTA CGAGCATGTG ATGGAAGTCG GCACCTATGC GAAAGAGCTG
CGCGGCGCGG TGAAGGAAAA AGAAGGCTTT ATGCAGATGG TGCGCGGTTT ACGCAAATTG
CGTAATCTCG GCCAGGGGTA TGTGAACTTC GGTGAACCAC TCCCGCTGAC CACCTATCTG
AATCAGCATG TTCCGCAATG GCGTGATGCG ATTGATCCTA TCGAAGCACA GCGCCCAAGT
TGGCTAACGC CGACGGTGCA GGATATCTCG ATGGATATCA TGGTACGCAT CAATAATTCT
GCGGCAGCAA ACGCGATGAA CCTGTGTTCT ACGGCTCTGT TGGCATCGCG CCAGCGCTCA
CTGACGCGCG AGCAAATGCA AGAACAGCTG GATTGCTATC TGCAACTGCT GCGTCAGGTT
CCTTATCACA AAGATATTAC GGTTCCCAAA AAGACAGCGG ATGAACTGTT GGAACATGCG
CTGAGCATGA ACAAGTTCGA AGTCGAGAAG GACAGCATTG GCGATATCAT CATTCTGCCG
CGCGAGCAGG CCGTTCTGAT GACGTACTAT CGCAATAACA TCCAGCATCT GTTGGTGTTA
CCGTCGCTGA TTGCCAGCAT CGTCATCCAC CACCGTCGGA TTACGCTTGC AGAAGTCGTG
CGCCAGATCG CGCTGATCTA TCCGCTGCTG CAATCCGAAC TGTTCCTGCA TTATTCCAAA
GAGCAGTTAC CGGGCGTGCT GGAAACGTTG GCTAATGAAC TGGTTCAACA GCAGTTGTTG
TGTAGTCGTG ACGGTGAGCT GGCGATCAAT CCGCCACGTA TCCGCACGCT GCAATTGCTG
TCGGCAGGCG TGCGTGAAAC GCTGCAACGT TATGCGATTA CGCTGTCGTT GCTGTGTGCG
AATCCAGAAA TCAACCGCGG AACGCTGGAA AAAGAAAGCC GGAACATGGC TCAACGCCTG
TCCGTCCTGC ACGGCATCAA TGCGCCAGAG TTCTTTGATA AAGCGGTGTT CTCAACGCTG
GTCGCAACCT TACGGACGGA AGGCTATATC ACCGACAGTG CGGAAGCGGC GCAAGGCGAT
ATCGTGGCGA TCTACAACAT TCTCGGCGAT TTGATCACCC CAGAAGTGCG CTTGACCATT
GAAAGCGCCA GCTCATCCGC TGAAATGGAA GCCGAAAGCC AGGCAGTGGA AGAGACAACG
CAGGAGTAG
 
Protein sequence
MSGWRKIYYK LLNLPLKLLV KSKVIPADPV VELGLDPSRP ILYVLPYNSQ ADLLTLRAKC 
LALGLPDPSQ SFEFNGVELP SHVFINDGPR VFRYYVPKQK SVKLFHDYLD LHRANPDLDV
QMVPVSVMFG RSPGREGHSQ ATPHLRLLNG IEKFFAVLWL GRDSFVRFSS PVSLRYMATE
HGTDKTIAHK LARVARMHFS RQRLAAVGPR LPVRQELFNK LLDSKAIKKA VDDEARSKKI
SHEKAQQNAI ALMEEIAADF SYEAVRLSDR VLSWTWNRLY QGINVHNAER VRQLAQDGHG
IVYVPCHRSH MDYLLLSYVL YHQGLVPPHI AAGINLNFWP AGPIFRRLGA FFIRRTFKGN
KLYSTIFREY LGELFARGYS VEYFMEGGRS RTGRLLEPKT GTLAMTIQAM LRGGTRPITL
VPIYVGYEHV MEVGTYAKEL RGAVKEKEGF MQMVRGLRKL RNLGQGYVNF GEPLPLTTYL
NQHVPQWRDA IDPIEAQRPS WLTPTVQDIS MDIMVRINNS AAANAMNLCS TALLASRQRS
LTREQMQEQL DCYLQLLRQV PYHKDITVPK KTADELLEHA LSMNKFEVEK DSIGDIIILP
REQAVLMTYY RNNIQHLLVL PSLIASIVIH HRRITLAEVV RQIALIYPLL QSELFLHYSK
EQLPGVLETL ANELVQQQLL CSRDGELAIN PPRIRTLQLL SAGVRETLQR YAITLSLLCA
NPEINRGTLE KESRNMAQRL SVLHGINAPE FFDKAVFSTL VATLRTEGYI TDSAEAAQGD
IVAIYNILGD LITPEVRLTI ESASSSAEME AESQAVEETT QE