| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0506 |
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| Symbol | aspA |
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| ID | 8131423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 589339 |
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| End bp | 590778 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644863784 |
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| Product | aspartate ammonia-lyase |
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| Protein accession | YP_003016097 |
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| Protein GI | 253686907 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1027] Aspartate ammonia-lyase |
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| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.560083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAA ACATCCGTAT TGAAGAAGAC CTGTTAGGCA CCCGAGAAGT TCCCGCAGAC
GCGTATTATG GCGTTCACAC GCTGCGTGCC ATCGAAAACT TCTACATCAG CAACAATAAA
ATCAGCGACA TACCCGAGTT CGTACGCGGC ATGGTTATGG TGAAAAAAGC CGCGGCGTTG
GCGAACAGAG AGCTGCAAAC TATCCCGAAA AAAATCGCCG ACGTCATCAT CCGTGCCTGT
GATGAAGTAC TGAATAACGG AAAATGCATG GATCAGTTTC CGGTCGATGT TTATCAGGGG
GGCGCTGGCA CGTCGGTCAA TATGAATACC AACGAAGTAT TAGCCAATAT TGGTCTGGAG
TTGATGGGTC ACCAGAAAGG CGAATACCAG TATCTGAACC CCAACGATCA TCTGAATAAA
TGCCAGTCCA CGAATGATGC CTACCCCACC GGATTTCGTA TCTCGGTCTA TGCCTCCGTA
CTGAAGCTGA CGGAAGCGAT CGCGAAACTG AGCGATGGCT TCGAGCGCAA AGCCAAAGAG
TTTGAAGACG TTCTGAAGAT GGGGCGGACC CAGTTGCAGG ACGCAGTGCC GATGACGCTC
GGCCAGGAGT TTCATGCGTT TAACGTGCTG TTGCAGGAAG AAATCAAAAA CCTGCTGCGC
ACGGCGGAGC TGCTGCTTGA AGTCAATCTG GGGGCTACCG CAATCGGTAC GCGTCTGAAT
ACGCCAGACG GCTATCAGCA ACTGGCGGTG CAGCGTCTGG CGGAAGTCAG CGGCCTGGCG
TGTGTGCCAG CAGAAGATTT GATCGAAGCG ACGTCAGACT GCGGCGCCTA TGTGATGGTG
CACAGCTCGC TGAAGCGTCT GGCCGTGAAG CTGTCGAAGA TCTGTAATGA CCTGCGTCTG
CTCTCTTCCG GTCCACGCGC TGGCCTGAAT GAAATCAACC TGCCGGAGCT ACAAGCGGGT
TCCTCGATCA TGCCCGCCAA GGTGAATCCG GTCGTGCCGG AAGTCGTCAA TCAGGTGTGC
TTCAAGGTCA TCGGTAACGA CACCTGCGTC ACGATGGCAT CAGAGGCCGG GCAATTACAG
TTAAACGTGA TGGAGCCAGT TATCGGTCAG GCGATGTTTG AATCGACCCA CATCCTGACT
AATGCCTGTT ACAACCTGCT GGAGAAATGC GTCAACGGCA TCACGGCGAA TAAGAGCGTC
TGCGAAGCCT ATGTCTTCAA CTCCATCGGG ATTGTGACGT ACCTGAATCC GTTCATCGGC
CACCATAACG GCGACATCGT CGGCAGGATC TGTGCAGAAA CGGGAAAAAG CGTACGCGAA
GTTGTACTGG AACGCGGCCT GCTAACCGAA GCCGAGCTGG ATGACATTTT CTCCATCCAG
AACCTGATGC ACCCGGCGTA CAAAGCTAAA CGCTACACCG ATGAAAACGA GCTTCCTTAA
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| Protein sequence | MSENIRIEED LLGTREVPAD AYYGVHTLRA IENFYISNNK ISDIPEFVRG MVMVKKAAAL
ANRELQTIPK KIADVIIRAC DEVLNNGKCM DQFPVDVYQG GAGTSVNMNT NEVLANIGLE
LMGHQKGEYQ YLNPNDHLNK CQSTNDAYPT GFRISVYASV LKLTEAIAKL SDGFERKAKE
FEDVLKMGRT QLQDAVPMTL GQEFHAFNVL LQEEIKNLLR TAELLLEVNL GATAIGTRLN
TPDGYQQLAV QRLAEVSGLA CVPAEDLIEA TSDCGAYVMV HSSLKRLAVK LSKICNDLRL
LSSGPRAGLN EINLPELQAG SSIMPAKVNP VVPEVVNQVC FKVIGNDTCV TMASEAGQLQ
LNVMEPVIGQ AMFESTHILT NACYNLLEKC VNGITANKSV CEAYVFNSIG IVTYLNPFIG
HHNGDIVGRI CAETGKSVRE VVLERGLLTE AELDDIFSIQ NLMHPAYKAK RYTDENELP
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