Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0496 |
Symbol | |
ID | 8131412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 580765 |
End bp | 580983 |
Gene Length | 219 bp |
Protein Length | 72 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644863773 |
Product | plasmid maintenance protein CcdA |
Protein accession | YP_003016087 |
Protein GI | 253686897 |
COG category | [R] General function prediction only |
COG ID | [COG5302] Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACACC GCGTCAGCGT TACCGTGGAC AAAGACAATT ATCAGGTTCT GAGTGCTGCC GGAGTCAATA TTTCCGGGCT GGTGAATGAT GCCATTGGCA AAGAAGCCCG CCGCATCAAG GCTGAGGAGT GGAAGAAAGA AAACCGCGAA GGGATGGAAG AAGTCGCCCG ATTTATCGCA CAGCATGGCT CCTTTGCGGA TGAAAACAGG AACTGGTGA
|
Protein sequence | MKHRVSVTVD KDNYQVLSAA GVNISGLVND AIGKEARRIK AEEWKKENRE GMEEVARFIA QHGSFADENR NW
|
| |