| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0477 |
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| Symbol | |
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| ID | 8131393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 563186 |
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| End bp | 564340 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644863755 |
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| Product | phosphonopyruvate decarboxylase |
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| Protein accession | YP_003016069 |
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| Protein GI | 253686879 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR03297] phosphonopyruvate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTGACC CGAATAAGCT CATTGAATTT CTTGCTCAAC GCGGCGTGCA TTTTTTCAGC
GGCGTCCCTG ATTCATTATT AAAAGCATTT TGTCTGGCGG TTGAAAGTAA TCATAGTGGG
CTTGCGCACC GTATCGCGAG TAATGAAGGT TGTGCGATAG GGATGGCAAT TGGCCATTAT
CTGTCGACGC GAACGCTGCC CGTGGTCTAT ATGCAAAACT CGGGGTTGGG CAATGCGATC
AACCCCCTCT GTTCTCTGGC TACGCCGGAT GTTTATGGTA TTCCGCTATT ACTCATTATT
GGCTGGCGCG GCGAAGTCGA TGACGGCGGC AAGCAACAAC ACGATGAGCC ACAGCATGTG
ATGCAGGGGC GAGTCACGTT GGCTCAGCTC GATGTCCTTG ATATTCCGCA TATCGTTCTG
GATAGCCATA GCGCACCTCG GTGGGATGAT ATTCAGGCTC TGCTCCAACG CTCGCATGAT
GAACATCGTC CCGTGGCGCT GGTGGTGAGA AAAAATACTT TTTCCTCGTC AGCCGCACCC
GCCAATTCCA CGGTGGAACC GGTGCTGATG CAGCGAGAAG CTATCGTCGC CGCCTGCCTG
AATGTGCTGC CCTCTCATCT TCCTATCGTG AGTACCACGG GCATGTTGTC CCGCGAACTC
TATGAGCTAC GTGAGCAGCG GAGCGAAGGG CATCAGCGAG ATTTTCTCAC TGTCGGCGGC
ATGGGCCTTG CCAGCCAGAT CGCGCTGGGC TTATGTGATG CGCAGCCGCA GCGGAAAGTC
GTGTGTCTGG ATGGGGATGG GGCGCTGCTG ATGCACATGG GCGGGCTGAC CAACACTGCC
CAGGCAAACA ACCTGATACA CATTGTCATC AACAACGGCG CCCATGACTC CGTGGGAGGA
CAGCCCACGG CAGCGTCCCG CTTACCGTTG GCACCCATAG CCGCTGCCAG CGGCTATGGC
GACACGTATT ACGTCGAGAC AGAAGACGCC TTGCAGGCGG CGTTGCAGCA GGCGCTGCGG
GCGCACAGCA GCCAGTTCAT TGAGGTGAAA TGCCGTGTCG GCCATCGCAG CGATCTGGGG
CGGCCTGCGA CGTCCCCCGC TCAAAACCGC GATGCATTTA TGCAGTTTCT TAATACACCT
CCTCAGGCCT CTTGA
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| Protein sequence | MIDPNKLIEF LAQRGVHFFS GVPDSLLKAF CLAVESNHSG LAHRIASNEG CAIGMAIGHY
LSTRTLPVVY MQNSGLGNAI NPLCSLATPD VYGIPLLLII GWRGEVDDGG KQQHDEPQHV
MQGRVTLAQL DVLDIPHIVL DSHSAPRWDD IQALLQRSHD EHRPVALVVR KNTFSSSAAP
ANSTVEPVLM QREAIVAACL NVLPSHLPIV STTGMLSREL YELREQRSEG HQRDFLTVGG
MGLASQIALG LCDAQPQRKV VCLDGDGALL MHMGGLTNTA QANNLIHIVI NNGAHDSVGG
QPTAASRLPL APIAAASGYG DTYYVETEDA LQAALQQALR AHSSQFIEVK CRVGHRSDLG
RPATSPAQNR DAFMQFLNTP PQAS
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