| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0467 |
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| Symbol | |
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| ID | 8131383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 534582 |
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| End bp | 540899 |
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| Gene Length | 6318 bp |
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| Protein Length | 2105 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644863745 |
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| Product | amino acid adenylation domain protein |
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| Protein accession | YP_003016059 |
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| Protein GI | 253686869 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01720] non-ribosomal peptide synthase domain TIGR01720
[TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATA TCGTAACGCT GTTAAAGCAG TTGGAGCGGC AGGGTGTCCG TCTGGCGTTA
AATGCGCAGG GGCAGTTGAT TTCGCAGTCC AGCAAAGATG CGATCACGGC AGACATCGGG
CGCACGATTA AGGAAAACAA AGACGCTATC GTGCGCTGCC TGACGGCGCA GCAGGCGTTT
GAACGTCCTA TTACGCCGCA GAATGCGACG TCTGGCCCGC TGTCGTCATC GCAAAGCGGG
CTGTGGTTTA TCGAACAGTA CGAAGAACAA TCACACCTCT ATAACATGCC GGTCTATTTT
CGCCTGACCG GAACGTTGGA TGTGGCTGCA CTGGAGTTTG CCTTTGACGC GCTGGCGCAG
CGCCACGCCA GCCTGCGCAC CCGTTTTGTG GTCAATGAAC AGGGTAAGGG CGAACAGCGT
ATCGATGCCT ATCAACCGTT TGTAATACAG CATGATGATT TCTCATCGTT GCCGGAAGCG
GAACGAGAAG CGTGCTTGCA GCAGCAGGTG AAAGCGGAAA TCAGCCGTCC GTTCGATCTC
ACTGCGGGCG ATCTCACCCG CGTGCGGTTG GTGAAAATGA GCGAACGGGT GCACATTCTG
ATGATCACCC AGCATCACAT TATTTCCGAT GGCTGGTCGG TGAAGAATAT GTTTGCGGAC
TTCAAACCAG CCTTTTTGGC CTGTCAAAAC CGCCAGCCTT ACCCTGTCGA GCCTACTCAG
CTTAACTATA TCGACTACGC ACACTGGTTC AATTCCAACG CATTTCTGGA TTACCACAAC
GAGTTCAAAC CGTTCTGGGT TGAGCGGCTG ACGGGGATTC CTGAAGTACA CAGCTTGCCG
TTGGATAAAT CGCGCCCCGC ACACCAGAAC AGCGGCGGCG AGGTCATTTT CTCCGCGATC
AACAACGAAC TGTGGGATAA ATTCAAGCGT CTGTGCCAGC GCTACAATAC GTCTAACTTT
ATCGGCCTGC ATGCCGTGTT TTCCCTGATG CTGGCGCGCA TCAGCGGCGA GAAAGACATT
GTCATTGGTT CGCCGCTAGC CTACCGCGAA CGGCCTGATA TCGAAGATGT CGTCGGCTTC
TTCGTTAACA CCATCGTGCT GCGCACCCAG TTGCAGGATC AACAGAGCTT TGTCGATTAC
CTGCAATACT GCCGCGAGCA GGATCTGTCG GCGTTCGATC ATCAACTCTA TCGTTTTGAA
GCGCTGAGCG AGGCGATCGG TTCCGATCGC ACCACCGCGA TCAACCCGAT CTTCCAGGTT
ATGCTGGTGT ATCAGGCCAA AGTGGATTTC AACGATCTGA TCCCTGGCTG TGATGCAGAG
GAAGAGACCT CGCCCGTGCT GCCCGCTAAA ACGGATATTT CAGTCAAGGT GACGGAGCTG
ATGGGTGAGG TGCGGTTGGA CTGGCTCTTT GCCACCGCGC TGTTTGAGCG CCAGACGATC
CAGTATTACG CCGATCGCTT TATCCGGCTG ATCGAAGCCG TGGTTGAGGC CCCGGAAACC
GATGTCTGGC ATCTGCCGCT GATGGAGGCG GATCGCTTTG CCGCCGTGCT GGCGGAAAGC
CAGCAGCTGC CACGTAGCTA CCCGCAGCCG CTGTTAACCG TAACCGACGT GATTGAAGCC
GTGGCACAAC GTGATCCTCA GCAGTTGGCG ATTGCTTTTG ACGGTGAACA GCGCACCGAT
ACGCTGACGT ATGGCGAACT GAACAGGCAG GCCAATCAGT TGGCACACTG GCTGCACCGT
CAGGGACTGG GCGAACAGTC GTTGGTTGGC GTGCTGGCGA AACGCGATCG CTATTTTGTT
ATTGCCTTGC TGGCCGTCTG GAAAGCGGGT GCCGCCTATG TGCCGCTGGA TCCTGACTAT
CCGCCAGAGC GGCTGCGCCA CATCATTACC GATGCCAATC TTGCTGTTAT TCTCGGTGGC
GATGGGGAAC AGTTGGCACA GTGGTCAGCC GAACAACGTA TCGATCTGGC CGATCCGGCC
GTTGTCGCAC AGTGGCACGA TCTACCGGGT GATGAGTCTC CTGCTATTCC ACGCCATGCA
CAACAGCTGG CACAGGTGAT CTACACCTCG GGATCGACCG GTCTGCCGAA GGGCGTGATG
ATCGAACACG GCTCGTTGAT CAACCTGTTG GGCGATCATC GCGATCGCAT CGATTTCACG
CCGCAAAGTA CCATGTTCAA CTGCATGTCG CTCTCCTTTG ATGCCGGTAA TATGACGACG
CTGCTGCCGC TAAGCTGTGG TGGCACACTG GCGTTTGGCG AACCCAACGA TCGGGCGATT
GTGCAGGCCG AACAGGCCTG CGCGACGCAC CTGATCCTGC CGACGGCGCT GATGTCGATT
CTCGATCCCA AACAGGTTAA CGGCATTCAG GCTATTGGCA TGGGCGGTGA AGCCTGCCCG
AACGCCGTGG TGGAAAATTG GGCCGATAAG GTCGCGCTGT ATAACATGTA CGGGCCGACG
GAGTGTACCG TCACTGCGTT GAGTACGCGC CTGCGTAAAG GTCAGCCTGT CACCATCGGT
AAACCTATTG CTCATATTCA GGCGCTGATT CTGGACGCTG CCGGACAGCT GTGCCCGGCG
GGCGTGCCGG GTGAACTATG TCTTGCTGGG CTTGGACTGG CGCGCGGCTA CCTCAACCAG
CCGCAGATGA CAGCCAGCCG CTTTGAACAC ATCACGCTGA ATGACGTGAA CCGTGTCGGA
CAGGGCACGG CGACGCTGCG TATTTATCGC ACGGGTGACA AGGCCAGATT GCTGAACAAC
GGTGACTATG AATACTGTGG CCGTATTGAT GAGCAGATCA AGCTGCGTGG CTATCGCATC
GAACCGGGTG AAATCGAGGC GCAGCTGGCG GCGGTCTGCC CGTCTCTGAA GCAGGTTAAA
GTTATCGTGG CGCAGGTGGG AAGCCGTCCG GCGCTGGTCG CTTATGCCAC GGTGAAAGCG
GGCGGCGGCA CACCGGAACC TGCCGCTGTG CTGATTGATG TGGCGAAACA CCTGCCGGAA
TACATGGTGC CGTTCCGACT GATTCTGCTG GAAGACATGC CGCTGACACC GAACGGCAAG
CTCAATACGA AACAGCTGCC GCCGGTGCTG GAAGCGAGCG ACGGCGATGG CGAAGCTGAC
AACCCGCTGG AAGCAGACGT GCTGGCGATT TGGCGCAGCG TGCTGAATAC GCCGCTGGGC
GTTGAGGATG ATTTTTTCCG CTTAGGCGGC GATTCGATCC TCAGTATTCA ACTGACGACG
CGTCTGCGCA GCGCAGGCTA TGCCTGCACG GTGAAGGATG TTTTCGAAGC GAAAAGCGTG
CGGCGTCTGT GCCGCGTGCT GGCGCAGAAC AACCGTGACA CCGGCATTGT GGCAGAGCAG
GGGACGCTGG AAGGCGAATT CGCGCTGCTG CCGATTCAGC GCTGGTTTAT GGAACAACCC
TTGGCACGCC CTGAACACTG GAACCAGGCG GCGATGATCC AATTGCCGGA AGTGGATGCT
GGCCGCCTTA CCACGATGTT GCAGGCGCTG ATGGCGCAAC ATGACGCGCT GCGTCTGGCC
TGTGATGCCG AAGGGCAACG TTATCTGACG GATGTACCTT GCCCAGCGGT GTCGACGCTG
GATTATCGTC AGCTTGGTGA CGACGGCCTG CAACAGGCGT TTACCGCGCT ACAGAGTGAA
TTCGCTCCCG CGCAGGGAAG AACGATGGCC TGCGCGCTGG TGCGTCACCA TCCGCAGGCG
GACACGGCGG TGTTCCTCGC TTTCCACCAT TTGGTGATCG ATGCCGTTTC CTGGCGCATT
CTGGTTGACG ATCTGGAGCG GTTGTACCTC GGTGAACCGC TGCCGCCGAA AACGTCGAGC
TATCGCCAAT GGGGCACGGC GCTGCACCAC TACGCGACGC AGCATGCGGA ACAGCTGACG
TACTGGCAGG CGCAGGAAAA CGGCGTGGAT CAGACGGCGC TACTGGCAGC GAAGGATCCA
CAGGGTCAGG CCAGCGCCGC GATGCTGACG CTGGATGCAG AAACCACGAG CCAACTGGTG
AGCGAGGCCA ATCGGGCTTT CAATACCGAC GTCAGCGATT TGCTGCTGGC GGCGCTGACC
CGCACGCTAA ACGATCTCGG TTGGGGCGAC AAAGCGCGCA TCATGCTGGA AGGGCACGGC
CGTGAAGCGA TTGATCCGAC GCTGGATGTC AGCCGCACGG TGGGGTGGTT TACCAGTACT
TATCCGGTGT GTCTGCAAGA TCGATCCGAC TGGGCTTCTC TGATTCAATC CTGCAAGGAA
CAGCTGCGTC AGGTGCCGGA TAAAGGCGTT GGGTTTAATC CGCTGCGCTA CCATCACCCG
CAGGGCAATT CGCTGACGCT CTCGCCGATT GTGTTTAACT ATCTTGGGCT GTCGGTTCAT
ACCGCTGGTA CATGGCGTCC GGTGGACGTC GCGCCGGGAG TCTGTGTCGC GCTGGAGAAT
AAACCTGCAG AGATTATCAG TCTCCACGGC GGTATTGCGG GCGGACAACT GACGCTGCGT
CAGGTCGGTT GCTTAAACCA GCGTGACAGT GAACGTCTGA TGGTACGGCT GACTGAGAAT
CTGCGTGCGC TGACGGCAGC CTGTCTGGCT CAGCTACATC ACGGCACTGT CTTTACCCCC
AGCGACTTCC CGGCGGTGAC GCTCAGCCAG ACGCAGCTCG ATAGCCTGTC GCAGCGTTAT
GACATCGACA CGCTGTTGCC GCTGTCATCG CTCCAACAGT CGATGCTGTA TCACCGCCTG
CGCTGTCCGC AGGACGATGC CTATCATCTG CAAACGCCGG TTCGCTATGC GCAGGCGCTG
GACGTGGAAG GCTATCGTCA GGCATGGCAG CGTCAGATTC AGCGGTTCCC GGCGCTGCGT
GCCGCGCTGG AAAGCGAACA GACCAGCGTA CAGGTGATTG TGAAGCAGGC AGACCTGCCT
TTCTACTATC AGGATGTCAC GCAGGAGGCC GATCCACAGG CGGTCATTGA ACGCTATCGC
CAGCAGGATT TACGCACCGG ATTTGATTTG TCACAGCCGC CGCTGTTGCG CATTGCCTGT
TTCCGTTTGG GCGAGCAGGA CTATCGCGTG CTTCTAAGCT GCCATCACAG CGTGATTGAC
GGCTGGAGCG GACCACAGCT GCTGGGCGCG GTGCATCGTG ATTATTTGCT GCTAATGCGC
GGTGAAACAC CCACGATTCA GGTCGATAGC GCCTATGTGG ATTATGCGCT GCACGCCGTG
GCGCAGCAGC CCGCCGTTGA GGCTTTCTGG CAGCAGCGTC AGCCACTGCT AGTGCAGACA
AACGATGTGG CCGTGCTGTT TGCGGCGGCA GGCAAACGCG CCGATCTCAG CCAGCATCTG
ACACAGATTG AACCGCAGGT TACCAGCGTG AGCCTGAACG AACAGGATCA GGCGACGTTA
ACCGCTTTTG CCCGCGAAGT GGGTGTCACT CACAGCATTA TCGCGCAATA TGCCTGGCAT
CGGCTGCTAG CGCGGTCGAC AGGCGATGCG GTCAGTATTG TCGGGAACGT GCTGTCGGGG
AGGGAAAGCC CGGTGGACGA CGTGGCGAGC AGCGTGGGTC TGTACATCAA TAGCCTGCCG
CTGGCGCTAA GCTGGCAGCA GCCGATGTCG CTGCAACAGC ATTTGGTGCA GTTGCAGAAT
GAGCTGATGG CGATGAATCA GCATGCTACG CAGTCGCTGA TTGCCCTGAC GGCCGGACGC
CCGCGTCTGT TCAACAGCCT GTTTATTTAT GAAAACTATC CCGGTGCGAA AGCAGAACCG
GGCCAACGCG CTGACGATCC GCATCGGTTA TCTCCAGAGT TTTCAGCCGC CTATGAAAAA
GTCGAGATGC CGCTGAATCT GGTGGTGCGT GAGCAGGCGG GTTGCATGCT GCTGCGCTTC
GAGTTTGATG CCGATGTGTT GGACAGTACG CAGGCGCGTC GGGTGCTGAT GCGCTGGCAT
GACGAGGTGG TCGCGCTGAT CAATAGCGCG CCGCAGCAGC CAGCCGAGAT TATCGGGCAT
GAGAAAGCGA CAGGCTCGGT GGTTGCGCAG AAAACGGCGG CAGATAGCGG TATTAGCCAG
CCTGATACGC CGTCAGCCCA GTTGCTGTTG CGCGTGTGGG CGCAGGTGCT ACATCTCGCT
GAATCTGGCC TCTGGTCACA GACGCTGTGT GAATGCGGTA TTGATTCGCT CCGGCGTATT
GCGTTGGCGC AGGCACTGAG CCGTGCGTTA GCGCAGCCGG TGAGTGTGGC GCTCTTGCAG
CGCTATCCAT CCCCGCAGGC GCTGAACGGA TATCTGGCAC AGTCGAGAGT GACCGCCAAT
GAGGAAACGC TGTCATGA
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| Protein sequence | MKDIVTLLKQ LERQGVRLAL NAQGQLISQS SKDAITADIG RTIKENKDAI VRCLTAQQAF
ERPITPQNAT SGPLSSSQSG LWFIEQYEEQ SHLYNMPVYF RLTGTLDVAA LEFAFDALAQ
RHASLRTRFV VNEQGKGEQR IDAYQPFVIQ HDDFSSLPEA EREACLQQQV KAEISRPFDL
TAGDLTRVRL VKMSERVHIL MITQHHIISD GWSVKNMFAD FKPAFLACQN RQPYPVEPTQ
LNYIDYAHWF NSNAFLDYHN EFKPFWVERL TGIPEVHSLP LDKSRPAHQN SGGEVIFSAI
NNELWDKFKR LCQRYNTSNF IGLHAVFSLM LARISGEKDI VIGSPLAYRE RPDIEDVVGF
FVNTIVLRTQ LQDQQSFVDY LQYCREQDLS AFDHQLYRFE ALSEAIGSDR TTAINPIFQV
MLVYQAKVDF NDLIPGCDAE EETSPVLPAK TDISVKVTEL MGEVRLDWLF ATALFERQTI
QYYADRFIRL IEAVVEAPET DVWHLPLMEA DRFAAVLAES QQLPRSYPQP LLTVTDVIEA
VAQRDPQQLA IAFDGEQRTD TLTYGELNRQ ANQLAHWLHR QGLGEQSLVG VLAKRDRYFV
IALLAVWKAG AAYVPLDPDY PPERLRHIIT DANLAVILGG DGEQLAQWSA EQRIDLADPA
VVAQWHDLPG DESPAIPRHA QQLAQVIYTS GSTGLPKGVM IEHGSLINLL GDHRDRIDFT
PQSTMFNCMS LSFDAGNMTT LLPLSCGGTL AFGEPNDRAI VQAEQACATH LILPTALMSI
LDPKQVNGIQ AIGMGGEACP NAVVENWADK VALYNMYGPT ECTVTALSTR LRKGQPVTIG
KPIAHIQALI LDAAGQLCPA GVPGELCLAG LGLARGYLNQ PQMTASRFEH ITLNDVNRVG
QGTATLRIYR TGDKARLLNN GDYEYCGRID EQIKLRGYRI EPGEIEAQLA AVCPSLKQVK
VIVAQVGSRP ALVAYATVKA GGGTPEPAAV LIDVAKHLPE YMVPFRLILL EDMPLTPNGK
LNTKQLPPVL EASDGDGEAD NPLEADVLAI WRSVLNTPLG VEDDFFRLGG DSILSIQLTT
RLRSAGYACT VKDVFEAKSV RRLCRVLAQN NRDTGIVAEQ GTLEGEFALL PIQRWFMEQP
LARPEHWNQA AMIQLPEVDA GRLTTMLQAL MAQHDALRLA CDAEGQRYLT DVPCPAVSTL
DYRQLGDDGL QQAFTALQSE FAPAQGRTMA CALVRHHPQA DTAVFLAFHH LVIDAVSWRI
LVDDLERLYL GEPLPPKTSS YRQWGTALHH YATQHAEQLT YWQAQENGVD QTALLAAKDP
QGQASAAMLT LDAETTSQLV SEANRAFNTD VSDLLLAALT RTLNDLGWGD KARIMLEGHG
REAIDPTLDV SRTVGWFTST YPVCLQDRSD WASLIQSCKE QLRQVPDKGV GFNPLRYHHP
QGNSLTLSPI VFNYLGLSVH TAGTWRPVDV APGVCVALEN KPAEIISLHG GIAGGQLTLR
QVGCLNQRDS ERLMVRLTEN LRALTAACLA QLHHGTVFTP SDFPAVTLSQ TQLDSLSQRY
DIDTLLPLSS LQQSMLYHRL RCPQDDAYHL QTPVRYAQAL DVEGYRQAWQ RQIQRFPALR
AALESEQTSV QVIVKQADLP FYYQDVTQEA DPQAVIERYR QQDLRTGFDL SQPPLLRIAC
FRLGEQDYRV LLSCHHSVID GWSGPQLLGA VHRDYLLLMR GETPTIQVDS AYVDYALHAV
AQQPAVEAFW QQRQPLLVQT NDVAVLFAAA GKRADLSQHL TQIEPQVTSV SLNEQDQATL
TAFAREVGVT HSIIAQYAWH RLLARSTGDA VSIVGNVLSG RESPVDDVAS SVGLYINSLP
LALSWQQPMS LQQHLVQLQN ELMAMNQHAT QSLIALTAGR PRLFNSLFIY ENYPGAKAEP
GQRADDPHRL SPEFSAAYEK VEMPLNLVVR EQAGCMLLRF EFDADVLDST QARRVLMRWH
DEVVALINSA PQQPAEIIGH EKATGSVVAQ KTAADSGISQ PDTPSAQLLL RVWAQVLHLA
ESGLWSQTLC ECGIDSLRRI ALAQALSRAL AQPVSVALLQ RYPSPQALNG YLAQSRVTAN
EETLS
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