Gene PC1_0461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0461 
Symbol 
ID8131377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp525327 
End bp526589 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content58% 
IMG OID644863739 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003016053 
Protein GI253686863 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAA GCATGTACAG CCAGCACACC CGACCTGTTG TGCATTTGGC GCTGCTCATC 
AACATGCTTT CTCTCGGCAG CCTGATGATG GTGATGCCGT TAGGCCCCGA TTTCATCAGC
GCGCTTTCCA TGGATGCCAA GAACATCGGC TACATTAGCG GTGGCGCAAC GTTTGCCTCC
GCCATCGTCG GCTTCCTCGC CGCTCCCTAT CTGGACAGAT TTAACCGCAA ACATGCTCTG
CTCGTTCTGC TGACGCTGCG CTTCGGCCTG ACGGCGGCCT GCATGTTTGC CACCAGCCAA
ACCCATCTTT TAGTGCTGTT TATTCTGGCG GGCTGCGTGG CCGGGCCGGC CTCTGGCGTG
TTGATGGCGG CGGTTGTCGA TATTGTGCCG GCCAACGAGC GCGGAAAGCA GTTGGCCTAC
GTCGGTATGA GTTTTTCGCT CGCGGCCATT ATCATCATGC CACTGTCGCT GGAGTTGGCT
CACCGTATTA ACTGGCAAGC GCCGTTTTAT ATTTTCGGCC TCGGCGGCCT GCTGCTGGCG
CTGTTAGTGC TGTGGCTCTT TCCTTCCATG CCGCCGACGC ACCGGGCCCA GCAAAGCGCT
TCTCCCAGCA CATCCCCCAC TTCCGTATTA CACGACCTGC TGGCCTCCCC TCTTTTCCTG
TTGGGGCTGA CAGTGGTTTC GCTACAGATG TTCGGCCATT TCCTGCTGAT TCCCCATTTT
TCCAACTACT TTCAGTTCAA TCTGGCTTTC CCACGGGATG ATATTTCCCT GCTTTATCTT
TGCGGCGGGC TGGGAAGCAT GGTGACCATG CAGCTGTGCG GCAACCTGCT GGATCGAGGC
TATGCCAGCC GGACGATCGT GGTGACAACG CTGCTGCTAG CCGTTGTCAT CCTCTGCGGT
TTCGTTTTGC CCTTTTCGCT TTCCCTGTAT CTGGTGTTCA CCCTGTTCAT GGCGCTCAGC
GCAGCGCGCT CCAGCAGCAC ACTGGCGATT ACCGCAGGTA TTCCGCTGCC ACATCAGCGC
GCCGCGTTTA TGTCCTATCA GGGAACTGCA GCCAATGTGG CATCGGGGCT CGCCAGCGTG
GCCTCTGCCG CGTATCTGAG CACCTCGGTT GAGGGAAGAA TTGACGGGTT CTCACAGCTT
GCCGTCGCCA GCACCATCTT TGCGCTGGCC GCCATGCTGC TGACCCTGCG CCTGATTCCA
CTGCTGGCTG AACGCAGCCG GAAGATGGCA GCACGCCAAC CTGTGCAAGC GACGGGGCAA
TAA
 
Protein sequence
MDESMYSQHT RPVVHLALLI NMLSLGSLMM VMPLGPDFIS ALSMDAKNIG YISGGATFAS 
AIVGFLAAPY LDRFNRKHAL LVLLTLRFGL TAACMFATSQ THLLVLFILA GCVAGPASGV
LMAAVVDIVP ANERGKQLAY VGMSFSLAAI IIMPLSLELA HRINWQAPFY IFGLGGLLLA
LLVLWLFPSM PPTHRAQQSA SPSTSPTSVL HDLLASPLFL LGLTVVSLQM FGHFLLIPHF
SNYFQFNLAF PRDDISLLYL CGGLGSMVTM QLCGNLLDRG YASRTIVVTT LLLAVVILCG
FVLPFSLSLY LVFTLFMALS AARSSSTLAI TAGIPLPHQR AAFMSYQGTA ANVASGLASV
ASAAYLSTSV EGRIDGFSQL AVASTIFALA AMLLTLRLIP LLAERSRKMA ARQPVQATGQ