| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0457 |
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| Symbol | |
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| ID | 8131373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 519955 |
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| End bp | 520752 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863735 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_003016049 |
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| Protein GI | 253686859 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.723414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCTTCTG AACGATACCG TTTTATCGAC ACCCACTGTC ATTTCGATTT TCCCCTCTTT
TACGATGATG CACCGGAAAG CTTACGTCTG GCGCAAGACG CAGGGGTTGA GCGCATCATT
ATTCCCGCCG TGGCTTCTCA GCATTTCGAA CGCGTGTTGA TGCTCGCTCG TACTTACCCA
TCGCTTTATG CTGCGCTAGG CCTCCATCCG CTTTATATCG CCGAGCATCA GGAAGATGAC
CTGATTCGTC TGGAAGACGA ACTGCGGCAA CAGCCTGCCA GACTGGTCGC GGTCGGTGAG
ATTGGGTTGG ATCTCTACAT GCCGGAACCA CAGTTCGAGC GACAGCTTAC CTTCCTTGAA
GCTCAGCTTC GGCTGGCGAA AAAATACGAT CTCCCGACGA TCCTGCACTC GCGGCGCAGC
CACGACAGGC TGGCGCAATT GCTCCGTCGT ATCGACGTGC CGCGTACCGG TGTGGTTCAC
GGGTTTGCGG GCAGTCTGGC GCAGGCGCAG GCCTTTATCC GACTGGGTTA TTACATCGGC
GTCGGGGGAA CCATTACCTA TGACAGGGCG AATAAAACGC GTCAGGCGAT TGCGCAGCTG
CCGTTAGATC GGCTGCTGCT GGAAACGGAT GCACCCGATA TGCCGATGAG TGGCTATCAA
GGGCAGCCAA ACCGACCCGA GCGCATTTCG TGTGCGTTTC AAACGCTGTG TGAGCTACGT
GCAGAATCGC CTGAGGAGAT TGCCGAGGCG CTCTGGCAAA ATTCGTTCAG GCTATTTGGA
CGGCTCATTC CGACATAA
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| Protein sequence | MPSERYRFID THCHFDFPLF YDDAPESLRL AQDAGVERII IPAVASQHFE RVLMLARTYP
SLYAALGLHP LYIAEHQEDD LIRLEDELRQ QPARLVAVGE IGLDLYMPEP QFERQLTFLE
AQLRLAKKYD LPTILHSRRS HDRLAQLLRR IDVPRTGVVH GFAGSLAQAQ AFIRLGYYIG
VGGTITYDRA NKTRQAIAQL PLDRLLLETD APDMPMSGYQ GQPNRPERIS CAFQTLCELR
AESPEEIAEA LWQNSFRLFG RLIPT
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