Gene PC1_0454 details

Gene Information

• Locus tag: PC1_0454
• ID: 8131370
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 518608
• End bp: 519216
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644863732
• Product: periplasmic protein
• Protein accession: YP_003016046
• Protein GI: 253686856
• COG category: [R] General function prediction only
• COG ID: [COG2823] Predicted periplasmic or secreted lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.390695
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA CCACATTGAC AAAATCGCTG ATCGTAGTTG CTCTGAGTTC GATTCTGGCT 
GGCGGTGCCA TGGCGGAAGA AACATTAGGG CAGAAAGTAG AACGTATCGC GGATACAACT 
GGTGCAAAAA TCGATAGCTC CGCCAATAAA GCCTCTGGCT ACATGAGTGA CAGCGCTATC 
ACAGCAAAAG TGAAGAGTGC GTTGCTGGAA GATAAATCCA TTACCAGCAG CGACATTTCC 
GTTGAAACGT CAAAGGGTGT CGTCACACTC AGCGGCTTTG TCGGTAGTCA GGCACTGAGC 
ACTCGGGCGG TGGAAATTGC CACTCAGGTT GAGGGCGTCC AATCCGTCAG CGACAAACTG 
CAGGTTAAAG ATAATCAATC ACAGTCGGTT GGTGCTTATG CCGATGATGC GGTGGTGACC 
AGCACGATTA AGGCGAAACT GCTGGCGGAT GACATTGTTC CGTCTCGCAA AGTGAAAGTC 
GAAACGCAGG AAGGTGTTGT GCTGTTGAGC GGTGAAGTCG ACAACAAAGC GCAGTCCGAT 
CGTGCAGAAA GTATTGCGAA GGCTGTTGAC GGCGTGAAAA GCGTTAAAAA CGACCTGACC 
GTTAAATAA 

 

Protein sequence

MKKTTLTKSL IVVALSSILA GGAMAEETLG QKVERIADTT GAKIDSSANK ASGYMSDSAI 
TAKVKSALLE DKSITSSDIS VETSKGVVTL SGFVGSQALS TRAVEIATQV EGVQSVSDKL 
QVKDNQSQSV GAYADDAVVT STIKAKLLAD DIVPSRKVKV ETQEGVVLLS GEVDNKAQSD 
RAESIAKAVD GVKSVKNDLT VK