| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0453 |
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| Symbol | prfC |
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| ID | 8131369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 516514 |
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| End bp | 518103 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644863731 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_003016045 |
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| Protein GI | 253686855 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.267512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCCAA GTGAATACGC CCGCGAAGTC TCTAAAAGAA GAACGTTCGC TATCATTTCT
CACCCCGATG CCGGTAAAAC CACGATTACC GAAAAGGTCC TGCTGTTCGG ACAGGCGATT
CAGACTGCCG GTACGGTAAA AGGGCGTGGT TCAAACCAGC ATGCAAAATC CGACTGGATG
GAGATGGAAA AGCAGCGTGG TATCTCCATC ACCACGTCCG TGATGCAGTT TCCCTATCGT
GAATGTCTGG TTAACCTGCT GGATACCCCG GGGCACGAAG ACTTCTCCGA AGATACCTAT
CGTACGCTGA CGGCAGTGGA CTGCTGCCTG ATGGTGATCG ACGCTGCAAA AGGGGTCGAA
GATCGTACGC GTAAGCTGAT GGAAGTCACG CGTCTGCGTG ACACGCCGAT TCTGACGTTT
ATGAACAAAC TTGACCGTGA CATCCGCGAT CCGATGGAAG TGCTGGATGA AGTCGAGAGC
GAGCTGAAGA TTGCCTGTGC GCCGATTACC TGGCCGATTG GCTGCGGTAA ATTGTTCAAA
GGCGTGTACC ACCTTTATAA AGATGAAACC TATCTGTATC AGACTGGTAA AGGCCATACG
ATTCAGGAAG TACGCATCGT TAAAGGGCTG GACAACCCGG AACTGGATAC CGCTGTTGGC
GAAGAGCTGG CTGCACAGCT GCGTGAAGAG CTGGAGCTGG TGAAAGGGGC ATCGCACGAA
TTTGAGCTGG ACGCGTTTCT GGCAGGCGAA CTGACACCGG TCTTCTTTGG TACGGCGCTG
GGTAACTTTG GCGTTGACCA TATGCTGGAC GGGTTAGTCG CTTGGGCACC TGCGCCGATG
CCGCGTAAAA CAGATACCCG CGAAGTGACG GCAGCGGAAG AGAAATTCAC CGGCTTTGTG
TTCAAGATTC AAGCCAACAT GGACCCGAAA CACCGTGACC GCGTGGCGTT TATGCGCGTG
GTGTCCGGGA GATATGAAAA GAGCATGAAG TTGCGTCAAG TTCGTACGGG CAAAGACGTG
GTGATTTCAG ATGCGTTGAC CTTCATGGCG GGTGACCGTT CCCATATTGA AGAAGCCTAC
CCGGGCGATA TCATCGGGTT ACACAACCAC GGCACTATCC AGATTGGCGA TACGTTTACG
CAGGGTGAAG ACATGAAATT CACCGGTATC CCTAACTTTG CGCCGGAATT GTTCCGTCGC
ATCCGCCTGC GCGATCCGCT CAAGCAGAAA CAGCTGCTGA AAGGATTGGT ACAGCTGTCT
GAGGAAGGCG CGGTACAGGT CTTCCGCCCA TTGACCAACA ACGATCTTAT CGTGGGGGCG
GTCGGCGTAC TACAGTTTGA TGTGGTGGTT GCCCGTTTGA AAACGGAATA TAACGTTGAG
GCGATTTACG AGTCGGTAAA CGTTTCTACC GCGCGTTGGG TTGAGTGCAG CGATGTGAAG
AAATTCGAAG AATTTAAGCG CAAGAACGAG CTGCATCTGG CGCTGGATGG CGGGGATAAC
CTGGCTTATG TGGCACCGAC GATGGTGAAC CTGAACCTGA CGCGGGAACG CTATCCAGAA
GTGACGTTCC ACCAAACGCG TGAGCATTAA
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| Protein sequence | MSPSEYAREV SKRRTFAIIS HPDAGKTTIT EKVLLFGQAI QTAGTVKGRG SNQHAKSDWM
EMEKQRGISI TTSVMQFPYR ECLVNLLDTP GHEDFSEDTY RTLTAVDCCL MVIDAAKGVE
DRTRKLMEVT RLRDTPILTF MNKLDRDIRD PMEVLDEVES ELKIACAPIT WPIGCGKLFK
GVYHLYKDET YLYQTGKGHT IQEVRIVKGL DNPELDTAVG EELAAQLREE LELVKGASHE
FELDAFLAGE LTPVFFGTAL GNFGVDHMLD GLVAWAPAPM PRKTDTREVT AAEEKFTGFV
FKIQANMDPK HRDRVAFMRV VSGRYEKSMK LRQVRTGKDV VISDALTFMA GDRSHIEEAY
PGDIIGLHNH GTIQIGDTFT QGEDMKFTGI PNFAPELFRR IRLRDPLKQK QLLKGLVQLS
EEGAVQVFRP LTNNDLIVGA VGVLQFDVVV ARLKTEYNVE AIYESVNVST ARWVECSDVK
KFEEFKRKNE LHLALDGGDN LAYVAPTMVN LNLTRERYPE VTFHQTREH
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