| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0449 |
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| Symbol | |
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| ID | 8131365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 512004 |
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| End bp | 513386 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644863727 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_003016041 |
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| Protein GI | 253686851 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0204936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAAAG CCGTCAAACG GGCGTTTGTA TGTAATGAAT GCGGGGCTGA TTACCCGCGC
TGGCAAGGGC AGTGCAGCGC CTGCCATGCC TGGAACACCA TTACCGAAGT GCGTCTCGCA
TCGGCGTCAG TATCACGTTC CGACCGCCTC ACCGGCTATG CGGGTGAGAG TGCTGGCGTC
AGCCGGGTAC AAAAGCTTTC AGAAATCAGC CTTGAAGCCC TGCCCCGTTT TTCTACCGGT
TTTCAGGAGT TTGACCGCGT TCTGGGCGGC GGCGTCGTTC CTGGCAGCGC GATTCTGATC
GGTGGTAACC CCGGTGCGGG TAAAAGTACC CTGCTGCTGC AAACGCTCTG CAAGCTGTCA
GAGAATATGA AAACCCTGTA CGTCACCGGG GAAGAATCCT TACAGCAGGT AGCGATGCGG
GCACACCGCC TCAATTTACC GACCCAGAAT CTCAATATGC TGTCGGAAAC CAGCATCGAA
CAGATTTGCC TGATTGCCGA GCAGGAACAG CCGAAGCTGA TGGTGATCGA CTCCATTCAG
GTCATGCATC TCGCCGATAT TCAATCGTCC CCCGGCAGCG TAGCGCAGGT GCGCGAAACC
GCAGCCTACC TGACGCGCTT CGCCAAAACG CGCGGCGTCG CCATCGTCAT GGTCGGCCAC
GTCACCAAAG ACGGCTCGCT CGCCGGACCG AAAGTATTAG AACACTGCAT CGACTGCTCC
GTGTTGCTGG ATGGCGATGC CGACTCCCGC TTCCGCACGC TGCGCAGCCA TAAAAACCGT
TTCGGTGCCG TTAACGAACT GGGTGTATTC GCGATGACGG AGCAAGGACT ACGCGAAGTC
AGCAATCCGT CGGCGATTTT CCTTAGCCGC GGGGACGAAG TGACGTCCGG CAGTTCCGTT
ATGGTGGTGT GGGAAGGCAC GCGCCCGCTG CTGGTCGAGA TTCAGGCGCT GGTTGATCAA
TCGATGATGT CGAACCCGCG CCGCGTGGCG GTCGGGCTGG AGCAAAATCG GTTAGCCATA
CTGCTAGCGG TGCTGCATCG CCACGGCGGC TTGCAGATGT CAGATCAGGA TGTGTTCGTG
AATGTCGTCG GCGGCGTCAA AGTCACCGAA ACCAGCGCCG ACCTCGCGTT GCTATTATCA
CTGGTTTCCA GCTTCCGCGA CCGCCCGCTA CCACAGGATC TCGTCATCTT CGGTGAGGTC
GGTCTGGCGG GCGAAATCCG CCCGGTTCCC AGCGGACAAG AGCGGATTAC CGAAGCCGCC
AAGCACGGCT TCAAACGCGC CATCGTTCCT CATGCCAATA TGCCGAAGAA AACGCCTGCC
AGTATGCAGG TATTCGGCGT GAAAAAGCTG GCCGACGCGC TGGCGATCTT AGACGATCTC
TAA
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| Protein sequence | MAKAVKRAFV CNECGADYPR WQGQCSACHA WNTITEVRLA SASVSRSDRL TGYAGESAGV
SRVQKLSEIS LEALPRFSTG FQEFDRVLGG GVVPGSAILI GGNPGAGKST LLLQTLCKLS
ENMKTLYVTG EESLQQVAMR AHRLNLPTQN LNMLSETSIE QICLIAEQEQ PKLMVIDSIQ
VMHLADIQSS PGSVAQVRET AAYLTRFAKT RGVAIVMVGH VTKDGSLAGP KVLEHCIDCS
VLLDGDADSR FRTLRSHKNR FGAVNELGVF AMTEQGLREV SNPSAIFLSR GDEVTSGSSV
MVVWEGTRPL LVEIQALVDQ SMMSNPRRVA VGLEQNRLAI LLAVLHRHGG LQMSDQDVFV
NVVGGVKVTE TSADLALLLS LVSSFRDRPL PQDLVIFGEV GLAGEIRPVP SGQERITEAA
KHGFKRAIVP HANMPKKTPA SMQVFGVKKL ADALAILDDL
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