Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0447 |
Symbol | |
ID | 8131363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 509981 |
End bp | 510622 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644863725 |
Product | 5-formyltetrahydrofolate cyclo-ligase |
Protein accession | YP_003016039 |
Protein GI | 253686849 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0290699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCATCTT CTGATTCATC AACATCTCCC GATACATCAC TCTCTCCTAC GACAGCGTCA CGTCAGCAGA TTCGTCAGGC TGTGCGGCAA CATCGGCGTT TACTAACGCC AGAGCAGCAG GCGTTATTTG CACAACAGGC GTGTGAGCGC GTCATGGCAC ACCCGAAAAT CATACGGGCA GAGAGCGTCG CGGTATTCCT GTCCTTTGAT GGCGAGTTGG ATACCTCCCC GTTGATTCAA CAGCTGTGGC AGCAGGGAAA GCGTGTTTAT TTGCCGGTTC TGCATCCGTT TCGTGCCGGG CATCTACTGT TCCTGCGCTA TGCGCCGGAC ACCGAGTTGG TACGCAATCG TCTGAAAATT ATGGAACCGC GTCTGGACGT GCGTCAGGTG CTGCCGTTAC CGCAACTGGA TATCCTGCTG ACGCCGCTGG TGGCGTTTGA TCATCAAGGA CAGCGGCTTG GAATGGGCGG CGGTTTTTAC GATCGTACGT TGCAGTACCG CAACCAGATG TCTCGCGGGC CTTACCCGAT TGGCCTGGCC CACGATTGTC AGCAGGTTGA CGCGCTGCCA GTGGAAAGCT GGGATATTCC GCTGCCGGAA ATTATTACCC CCTCTCGCCA CTGGCAGTGG AGCACGCGCT AG
|
Protein sequence | MSSSDSSTSP DTSLSPTTAS RQQIRQAVRQ HRRLLTPEQQ ALFAQQACER VMAHPKIIRA ESVAVFLSFD GELDTSPLIQ QLWQQGKRVY LPVLHPFRAG HLLFLRYAPD TELVRNRLKI MEPRLDVRQV LPLPQLDILL TPLVAFDHQG QRLGMGGGFY DRTLQYRNQM SRGPYPIGLA HDCQQVDALP VESWDIPLPE IITPSRHWQW STR
|
| |