| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0444 |
|---|
| Symbol | |
|---|
| ID | 8131359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 507158 |
|---|
| End bp | 508483 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644863722 |
|---|
| Product | proline aminopeptidase P II |
|---|
| Protein accession | YP_003016036 |
|---|
| Protein GI | 253686846 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0805194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCAC AAGAATTTCT TCGTCGTCGT CAGGGTCTGT TGGAAAAAAT GGCACCGGGC
AGCGCGGCGA TTATTTTTGC TGCGCCGGAA GCGCAGCGCA ATGCCGACAG TGACTATCCT
TATCGTCAAA ACAGCGATTT TTGGTATTTC ACCGGTTTCA ATGAACCAGA AGCTGTTCTG
CTGCTGGTAA AAAGCGATGC CAAACATCAT CACAGCGTGA TCTTCAACCG CGTACGCGAT
CTGACGGCCG AAATCTGGTT TGGTCGCCGT CTCGGTCAGG AAGCGGCGCC AGCCAAACTC
GGCGTTGATC GCGCCCTGCC GTTTGACGAA ATCAGCACGC AACTGCATCT ATTATTGAAC
GGTCTGGACG TGGTGTATCA CGCGCAGGGG CAATACGATT ATGCCGACAA GCTGGTCTTC
GCCGCGCTGG ATACCTTGCG CAACGGCACC CGTCAGGGAT TTGCCGCCCC CGCCACGCTG
ACCGACTGGC GTCCGTGGGT ACATGAAATG CGCCTGTTTA AATCGCCTGA AGAAATCAGC
GTCATGCGCC GCGCCTGTGA AATTACGGCG CTGGCCCACA CACGCGCCAT GCAAAAATGC
CGTCCCGGCA TGTATGAATA TCAGCTTGAA GGCGAAATTC ACCACGAATT TACCCGCCAC
GGTGCCCGCT ATCCTTCTTA CAACACGATA GTCGGCAGCG GCGAGAACGC CTGCATCCTG
CATTACACCG AAAACGAGAC GCAAATGCGT GACGGCGATT TGGTGCTGAT TGATGCGGGC
TGTGAATACA AAAGTTATGC TGGCGATATC ACCCGAACCT TCCCCGTCAA CGGCAAATTT
ACCGCACCGC AGCGTGCCAT TTACGACATC GTGCTGCGTT CGCAGCTGCG CGCACTGGAG
CTGTTTGGCC CAAGTCGCAG CATCCGCGAA GTGAACGAAG AAGTGGTGCG CATGATGGTC
AGCGGCCTCA TCAAACTCGG CGTGATGAAA GGCGACGTGG AAGAGCTGAT TGCCGAACAG
GCACATCGCC AGTTCTTCAT GCACGGCCTC AGCCACTGGC TGGGTCTGGA CGTGCATGAC
GTGGGGGATT ACGGCACAAC CGAACGGGGT CGCCCGCTTG AGCCGGGTAT GGTATTGACC
ATTGAGCCCG GTCTCTACAT TGCGCCTGAT GCCAAAGTGC CGCAGCAGTA CCGGGGAATT
GGCGTACGTA TCGAAGATAA CATCGTGATC ACCGAAAACG GCAACGAAAA CCTGACGGCT
GGTGTAGTTA AAGATGCCGA TGACATTGAA GCGCTGATGG CGCAATGGCA TGACAAGCAA
CACTAA
|
|---|
| Protein sequence | MNPQEFLRRR QGLLEKMAPG SAAIIFAAPE AQRNADSDYP YRQNSDFWYF TGFNEPEAVL
LLVKSDAKHH HSVIFNRVRD LTAEIWFGRR LGQEAAPAKL GVDRALPFDE ISTQLHLLLN
GLDVVYHAQG QYDYADKLVF AALDTLRNGT RQGFAAPATL TDWRPWVHEM RLFKSPEEIS
VMRRACEITA LAHTRAMQKC RPGMYEYQLE GEIHHEFTRH GARYPSYNTI VGSGENACIL
HYTENETQMR DGDLVLIDAG CEYKSYAGDI TRTFPVNGKF TAPQRAIYDI VLRSQLRALE
LFGPSRSIRE VNEEVVRMMV SGLIKLGVMK GDVEELIAEQ AHRQFFMHGL SHWLGLDVHD
VGDYGTTERG RPLEPGMVLT IEPGLYIAPD AKVPQQYRGI GVRIEDNIVI TENGNENLTA
GVVKDADDIE ALMAQWHDKQ H
|
|---|
| |