| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0419 |
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| Symbol | |
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| ID | 8131334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 481687 |
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| End bp | 482949 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644863697 |
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| Product | L-rhamnose isomerase |
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| Protein accession | YP_003016011 |
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| Protein GI | 253686821 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4806] L-rhamnose isomerase |
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| TIGRFAM ID | [TIGR01748] L-rhamnose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.701564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAC CAATTGAAAC CGCCTGGCAG TTGGCAAAAG CGCGTTACGC CAGCCTGAAT
ATTGACGTAG AGGCCGCGCT GGAACAGCTC GATCAGATTC CGGTGTCAAT GCACTGCTGG
CAGGGTGACG ATGTGGCCGG ATTTGAGAAC ACCGGCGGGC CACTGACCGG CGGCATTCAG
GCTACCGGCA ACTACCCCGG CAAAGCAAGC ACGCCGGATG AACTGCGTGC CGATCTGGAA
CAGGCCTTTG CGCTCATTCC CGGCCCCAAA CGGCTGAACC TGCACGCCAT CTATCTGGAA
TCCGCACAGC CCGTCGCCCG TAATGAAATT GCTCCCGAGC ACTTCCGCAC CTGGGTTGAG
TGGGCCAAAC GCCACCAGCT CGGGCTGGAT TTTAACCCGA CCTGCTTCTC TCACCCGCTA
AGCGCGGACG GCTTCACCCT GTCGCACCCG GACGAAAAAG TACGTCGCTT CTGGATTGAG
CACTGTCAGG CCAGCCGCCG GATTTCCGCC TACTTCGGTC GCGAACTCGG CACGCCGTCG
GTGATGAACA TCTGGGTGCC GGACGGCATG AAAGACTTGA CCATCGATCG TCTGGCATTC
CGTCAGCGGC TGCTCAGCGC GCTGGATGAG ATCATCGCCG AGCCGCTCGA TCAGGCGCAC
CATATCGACG CCGTAGAAAG TAAGCTGTTC GGAATCGGCG CGGAAAGTTT TACCGTCGGC
TCCAACGAAT TCTACCTCGG CTATGCAGCC AGCCGCGGCA CCGCGCTCTG TCTGGATGCC
GGACACTTCC ACCCGACCGA AGTCATTTCC GACAAAATCT CCAGTGCCAT TCTGTACGTC
CCGCGTCTGC TGCTGCACGT CAGCCGTCCG GTACGCTGGG ACAGCGACCA TGTGGTGCTG
CTGGATGACG AAACGCAGGC CATCGCACAC GAAATCGTAC GCCATAAGCT GCTTAATCGC
GTGCATATCG GGCTCGACTT CTTTGATGCC TCGATCAACC GCATTGCCGC CTGGGTTATT
GGCACGCGCA ATATGAAGAA AGCTCTGCTG CGCGCGCTGC TGGAACCCAC AGAAACGCTG
CGCAAGCTGG AACAAAACGG CGATTACACC GCGCGTCTGG CTCTGCTGGA AGAGCAAAAA
TCGCTACCGT GGCAGGCCGT GTGGGAACAC TACTGCCAGT GTCATGACGT CATCCCAGGC
AGCGAATGGC TGCAACAGGT GCGTCAGTAT GAAGAAACCA TCCTCACTCA ACGTCAAGGG
TAA
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| Protein sequence | MSTPIETAWQ LAKARYASLN IDVEAALEQL DQIPVSMHCW QGDDVAGFEN TGGPLTGGIQ
ATGNYPGKAS TPDELRADLE QAFALIPGPK RLNLHAIYLE SAQPVARNEI APEHFRTWVE
WAKRHQLGLD FNPTCFSHPL SADGFTLSHP DEKVRRFWIE HCQASRRISA YFGRELGTPS
VMNIWVPDGM KDLTIDRLAF RQRLLSALDE IIAEPLDQAH HIDAVESKLF GIGAESFTVG
SNEFYLGYAA SRGTALCLDA GHFHPTEVIS DKISSAILYV PRLLLHVSRP VRWDSDHVVL
LDDETQAIAH EIVRHKLLNR VHIGLDFFDA SINRIAAWVI GTRNMKKALL RALLEPTETL
RKLEQNGDYT ARLALLEEQK SLPWQAVWEH YCQCHDVIPG SEWLQQVRQY EETILTQRQG
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