Gene PC1_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0405 
Symbol 
ID8131320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp462292 
End bp463083 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content55% 
IMG OID644863683 
Producthypothetical protein 
Protein accessionYP_003015997 
Protein GI253686807 
COG category[R] General function prediction only 
COG ID[COG3541] Predicted nucleotidyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGAAA AGGATTATCG CGTCGATGCT GCCATGCGGA CGCGGATAAA ATTAGTCTTA 
CAGGATGTGG AAGAACGTTA TCAGGTGAAG GTGCTGTATG CCTGTGAGTC GGGGAGCCGT
GGCTGGGGAT TTGCCTCCCC AGATAGCGAC TACGACGTGC GCTTTCTCTA CGTGCATCGG
CCGGAGTGGT ATCTACGTGT CGAAGCACAG CGTGACGTAA TAGAGCTGCC TATCGACGAT
GAGCTGGACG TCTGTGGTTG GGAGTGGCGC AAAGCACTAG GCCTGCTTAA GCGGGCCAAC
CCGACGCTGA TCGAATGGCT GGATTCACCC GTTGTCTATC AAGAAGATCG GGATGCTACA
TCCGCACTGC GGGCGACGGT GCCGACGTGG TTCTCGCCAT CCAAGGCTCG CTGGCACTAT
CTGTCGATGG CGCGTAAAAA TTTTCGCGGC TATCTGCAAG ATGAGACGGT ACGCCTTAAA
AAATATTTCT ATGTGCTACG CCCGCTGCTG GCTGTGCGCT GGATAGAAGC AGGTAAAGGC
ATGCCGCCGA TGCGCTTTTC GCAGTTGCTT GCAGGGACGG TAGACGATCC GCGCCTGTTG
GCTGAAATCC ATCAATTGCT GGAAATAAAG CAACGGTCGG GTGAGGCGGA ATACGGCCCA
CGACGGGAAG TGATCCACGC GTTCATCACG CAGATGCTGA GTGATGCCGA TAGCCTCGCG
GAATTACCAG ACAGTAAGTC CGATGACGAC ACGATGCTGG ATGCGCTGTT GTACCGGACG
GTGATGGCGT AA
 
Protein sequence
MMEKDYRVDA AMRTRIKLVL QDVEERYQVK VLYACESGSR GWGFASPDSD YDVRFLYVHR 
PEWYLRVEAQ RDVIELPIDD ELDVCGWEWR KALGLLKRAN PTLIEWLDSP VVYQEDRDAT
SALRATVPTW FSPSKARWHY LSMARKNFRG YLQDETVRLK KYFYVLRPLL AVRWIEAGKG
MPPMRFSQLL AGTVDDPRLL AEIHQLLEIK QRSGEAEYGP RREVIHAFIT QMLSDADSLA
ELPDSKSDDD TMLDALLYRT VMA