Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0405 |
Symbol | |
ID | 8131320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 462292 |
End bp | 463083 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644863683 |
Product | hypothetical protein |
Protein accession | YP_003015997 |
Protein GI | 253686807 |
COG category | [R] General function prediction only |
COG ID | [COG3541] Predicted nucleotidyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAAA AGGATTATCG CGTCGATGCT GCCATGCGGA CGCGGATAAA ATTAGTCTTA CAGGATGTGG AAGAACGTTA TCAGGTGAAG GTGCTGTATG CCTGTGAGTC GGGGAGCCGT GGCTGGGGAT TTGCCTCCCC AGATAGCGAC TACGACGTGC GCTTTCTCTA CGTGCATCGG CCGGAGTGGT ATCTACGTGT CGAAGCACAG CGTGACGTAA TAGAGCTGCC TATCGACGAT GAGCTGGACG TCTGTGGTTG GGAGTGGCGC AAAGCACTAG GCCTGCTTAA GCGGGCCAAC CCGACGCTGA TCGAATGGCT GGATTCACCC GTTGTCTATC AAGAAGATCG GGATGCTACA TCCGCACTGC GGGCGACGGT GCCGACGTGG TTCTCGCCAT CCAAGGCTCG CTGGCACTAT CTGTCGATGG CGCGTAAAAA TTTTCGCGGC TATCTGCAAG ATGAGACGGT ACGCCTTAAA AAATATTTCT ATGTGCTACG CCCGCTGCTG GCTGTGCGCT GGATAGAAGC AGGTAAAGGC ATGCCGCCGA TGCGCTTTTC GCAGTTGCTT GCAGGGACGG TAGACGATCC GCGCCTGTTG GCTGAAATCC ATCAATTGCT GGAAATAAAG CAACGGTCGG GTGAGGCGGA ATACGGCCCA CGACGGGAAG TGATCCACGC GTTCATCACG CAGATGCTGA GTGATGCCGA TAGCCTCGCG GAATTACCAG ACAGTAAGTC CGATGACGAC ACGATGCTGG ATGCGCTGTT GTACCGGACG GTGATGGCGT AA
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Protein sequence | MMEKDYRVDA AMRTRIKLVL QDVEERYQVK VLYACESGSR GWGFASPDSD YDVRFLYVHR PEWYLRVEAQ RDVIELPIDD ELDVCGWEWR KALGLLKRAN PTLIEWLDSP VVYQEDRDAT SALRATVPTW FSPSKARWHY LSMARKNFRG YLQDETVRLK KYFYVLRPLL AVRWIEAGKG MPPMRFSQLL AGTVDDPRLL AEIHQLLEIK QRSGEAEYGP RREVIHAFIT QMLSDADSLA ELPDSKSDDD TMLDALLYRT VMA
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