Gene PC1_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0404 
Symbol 
ID8131319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp461052 
End bp462287 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content54% 
IMG OID644863682 
Producthypothetical protein 
Protein accessionYP_003015996 
Protein GI253686806 
COG category[S] Function unknown 
COG ID[COG1690] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA TGAAAATGCA GGATTACGAC ATGATGTCGC CCGTGAATAG CGCACCGGTA 
AAAATGTGGA CGCAGGGCGT GCCTGTGGAA CCGGAAGCTC GCGACCAACT GCTGAACACG
GCCAAAATGC CGTTCATTTT TAAACATTTG GCAGTGATGC CGGATGTGCA TTTGGGAAAA
GGATCGACGA TTGGTAGCGT GATCCCTACG CGTGGCGCGA TTATCCCGGC AGCAGTCGGC
GTGGATATCG GCTGCGGGAT GATTGCGGTG CGTACGTCAC TGGTTGCCAG CGACCTGCCG
GATAACCTGA TGGGGCTGCG TAGCGCGATT GAACAGGCGG TGCCGCACGG ACGTAGCGTA
ACGCGTTCCA AACGTGATGT CGGTTCCTGG CAGAACCCGC CACAAACGGT TGATGCGCAC
TGGTCACTGC TGGAACCGCG TTTTAAACGT TTGACGGATA AATATCCGCA GTTGCTGAAA
ACCAACAATT ACCAGCATTT GGGAACGCTA GGAACGGGTA ACCACTTTAT TGAAATCTGT
CTGGATGAGG TCGATCGCGT GTGGGTGATG TTGCACAGCG GGTCGCGTGG TGTGGGGAAT
GCGATTGGGT CGCTGTTCAT CAAGCTGGCG CAGGAAGATA TGCAGCAGCA CATTGCGAAT
CTGCCGGATC GTAATCTGGC GTATTTCGAG GAAGGTAGCC TGCACTTTGA CGATTATATC
GAAGCGGTGG AGTGGGCACA GGATTTTGCC CGTCATAACC GTGAAGTGAT GATGTCGCAT
ACGCTGGCAG CGCTGTCTCG CATTGTGACG AAGCCGTTTA CCACCCAGCA GGAAGGCGTG
AACTGCCACC ATAACTACGT GCAGCGCGAA ACGCACTTTG GTGAATCAGT GCTGATCACC
CGTAAGGGAG CTGTGTCGGC GCAGAAAGGT CAAATGGGGA TTATTCCGGG GTCAATGGGG
GCGAAGAGCT TCATCGTACG CGGATTGGGG AACGAAGAGA GCTTCTGTTC CTGTAGTCAC
GGCGCGGGGA GAACCATGAG CCGTACTGCC GCGAAAAAAC GCTTCACCGT GGAAGACCAG
ATTCGCGCGA CGGCACACGT CGAGTGCAGA AAAGACAGCG ACGTTATCGA TGAAATCCCG
ATGGCGTACA AAGATATCGA TAAGGTGATG GCGGCACAGT CATCGCTGGT GGAAATTGTG
CACACGCTGC GTCAGGTGGT GTGTGTGAAA GGATAA
 
Protein sequence
MEEMKMQDYD MMSPVNSAPV KMWTQGVPVE PEARDQLLNT AKMPFIFKHL AVMPDVHLGK 
GSTIGSVIPT RGAIIPAAVG VDIGCGMIAV RTSLVASDLP DNLMGLRSAI EQAVPHGRSV
TRSKRDVGSW QNPPQTVDAH WSLLEPRFKR LTDKYPQLLK TNNYQHLGTL GTGNHFIEIC
LDEVDRVWVM LHSGSRGVGN AIGSLFIKLA QEDMQQHIAN LPDRNLAYFE EGSLHFDDYI
EAVEWAQDFA RHNREVMMSH TLAALSRIVT KPFTTQQEGV NCHHNYVQRE THFGESVLIT
RKGAVSAQKG QMGIIPGSMG AKSFIVRGLG NEESFCSCSH GAGRTMSRTA AKKRFTVEDQ
IRATAHVECR KDSDVIDEIP MAYKDIDKVM AAQSSLVEIV HTLRQVVCVK G