| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0389 |
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| Symbol | |
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| ID | 8131303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 443904 |
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| End bp | 445019 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863667 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_003015982 |
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| Protein GI | 253686792 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00124488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCATCA TTCGATATCT GGTACGGGAA ACCTTTAAGA GCCAACTGGC CATCCTTTTC
ATTCTGTTAC TGATTTTCTT TTGTCAGAAA TTAGTGCGGA TACTGGGCGC TGCGGTTGAT
GGTGAAATCC CGACAAATTT GGTTATCTCC CTGTTGGGAT TGGGCGTGCC AGAGATGGTG
CAGCTCATCC TGCCATTAAG TCTGTTTCTT GGCGTATTGA TGACGTTTGG CCGCCTCTAT
GCGGAAAGCG AAATCACCGT CATGCACGCC TGTGGGCTGG GCAAACGCGT GTTGCTAAAA
GCTGCTCTGG CCCTGGCGGT GTTCACCGCT GTCATCGCGA CTATTAACGT CATGTGGCTC
AGCCCGTGGT CGTCCCGGCA TCAGGAAGAA GTGCTCGCGG AAGCGAAAGC GAACCCCGGT
ATGGCGACGC TGGTCGAAGG GCAGTTCCAG TCCGCACAGG GTGGCAACGC GGTGCTGTTT
GTTGGCAATG TTAAAGGCTC GGAGTTTCAG CACGTGTTTC TGGCGCAGCT GCGCCCCAGC
GGTAACGCGC GGCCTTCTGT CGTGGTTGCC GATCGCGGTC ATATCAAACA AAACGAAGAC
GGCGCGCAGG TCGTGACGCT GGATAACGGG TCGCGTTACG AAGGCACGGC GCTTTTGCGT
GATTTTCGTA TTACGGATTT CACCAACTAT CAGGCCGTGA TCGGCCACCA GAGCGTGACA
CTAAATAATA GCGACGTGCA GCAAATGGAT ATGCAAACCC TGTGGCATTC GGACGCGCAC
GATGCGCGCG CAGAGTTCCA CTGGCGCCTG ACGTTGATTC TTTCGGTGCT GATTATGGCG
CTGATGGTGG TGCCGCTGAG TGTGGTGAAT CCCCGTCAGG GCAGGGTGCT GAGCATGCTG
CCTGCGATGC TGCTGTACCT GATCTTCTTC CTGCTGCAAA GCTCGCTGCG TTCTAACGCC
AGTAAAGGAA AAATCGATCC GATGGTATGG GTCTGGCTAA CCAATCTGAT GTACTTTGGC
ATCGCGGTGA TGCTTAACCT GTGGGATACC GTACCGATGC GCAAAGTGCG TGCTCGCTTT
AAGCCTCGTA CTCTTAAAAC ACAAGGAGCG GCCTGA
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| Protein sequence | MIIIRYLVRE TFKSQLAILF ILLLIFFCQK LVRILGAAVD GEIPTNLVIS LLGLGVPEMV
QLILPLSLFL GVLMTFGRLY AESEITVMHA CGLGKRVLLK AALALAVFTA VIATINVMWL
SPWSSRHQEE VLAEAKANPG MATLVEGQFQ SAQGGNAVLF VGNVKGSEFQ HVFLAQLRPS
GNARPSVVVA DRGHIKQNED GAQVVTLDNG SRYEGTALLR DFRITDFTNY QAVIGHQSVT
LNNSDVQQMD MQTLWHSDAH DARAEFHWRL TLILSVLIMA LMVVPLSVVN PRQGRVLSML
PAMLLYLIFF LLQSSLRSNA SKGKIDPMVW VWLTNLMYFG IAVMLNLWDT VPMRKVRARF
KPRTLKTQGA A
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