| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0386 |
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| Symbol | valS |
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| ID | 8131300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 438687 |
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| End bp | 441542 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863664 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_003015979 |
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| Protein GI | 253686789 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACGA AATATAACCC GCAAGATATC GAGCAGCCGC TCTACGAACA CTGGGAAAAA
CAAGGCTACT TCAAGCCGCA CGGCGACACG AGTAAAGAAA GCTTCAGCAT CATGATCCCG
CCGCCCAACG TCACCGGCAG CTTGCATATG GGTCATGCTT TCCAGCAAAC CATTATGGAT
ACGTTGATTC GCTATCAACG TATGCAGGGT AAAAACACCC TGTGGCAGGC GGGGACCGAC
CACGCAGGTA TCGCCACGCA GATGGTCGTT GAGCGTAAAA TCGCCGCAGA AGAAGGCAAA
ACTCGCCACG ATTACGGCCG CGAAGCGTTC ATCGACAAAA TCTGGCAGTG GAAAGGCGAA
TCCGGCGGCA ACATTACCCG CCAAATGCGC CGTCTGGGCA ACTCCGTTGA CTGGGAGCGC
GAGCGCTTCA CCATGGATGA AGGCCTGTCC AACGCGGTGA AGGAAGTTTT CGTCCGTCTG
TATAAAGAAG ACCTGATTTA CCGCGGCAAA CGTCTGGTGA ACTGGGATCC GAAGCTGCGC
ACCGCGATTT CCGATCTGGA AGTCGAAAAC CGCGAAGTGA AAGGGTCAAT GTGGCACCTG
CGCTATCCGC TGGCCGATGG CGTGAAAACC GCCGAAGGGA AAGACTATTT GGTCGTCGCC
ACCACCCGTC CGGAAACCAT GCTGGGTGAT ACCGGTATCG CCGTTAACCC GGAAGATCCG
CGCTATAAAG ATCTGATCGG CAAAGAAGTG ATCCTGCCAT TGATTGGCCG CCGTATTCCG
ATTGTTGGCG ACGAACATGC CGATATGGAA AAAGGCACCG GCTGCGTGAA GATCACACCA
GCACACGACT TCAACGACTA CGAAGTTGGT AAACGTCATC AGTTGCCGAT GGTAAATATC
CTGACGTTCG ACGGTGATAT CCGTCAGAGT GCCGAAGTGT TTGATACCAA TGGCGAAGCC
AGCACCGTTT ACAGCAGCGA CATTCCAGAA GCCTTCCAGG GTCTGGAACG TTTTGCCGCA
CGTAAAGCGC TCGTCGCCGC ATTCGATGAG CTCGGCCTGC TGGAAGAGAT CAAGGCGCAC
GATTTGACCG TTCCTTACGG TGACCGTGGC GGCGTCGTCA TTGAACCGAT GCTGACCGAC
CAGTGGTACG TGCGCGCTGC CGTGCTGGCT AAGCCGGCGG TAGAAGCCGT TGAAGATGGT
CGCATTCAGT TCGTACCAAA ACAGTACGAA AACATGTACT TCAGCTGGAT GCGTGACATT
CAGGACTGGT GTATTTCCCG TCAGCTGTGG TGGGGTCACC GTATCCCAGC CTGGTACGAC
GCGAACGGCA ACGTCTATGT GGGACGTACC GAATCGGAAG TACGCAGTGA AAACAACCTC
GCTGATGATG TCGTTCTGAA TCAGGACGAA GACGTACTGG ATACCTGGTT CTCATCCGGC
CTGTGGACGT TCTCTACGCT GGGTTGGCCG GAGCAGACGC CAGATCTGAA AGCATTCCAC
CCAAGCAGCG TGATGGTGAG CGGCTTCGAC ATCATCTTCT TCTGGATTGC CCGCATGATC
ATGCTGACCA TGCACTTCAT CAAAGACGAA GACGGCAAAC CGCAGGTGCC ATTCCACACC
GTCTACATGA CCGGCCTGAT CCGTGATGAG GAAGGCCAGA AGATGTCCAA ATCCAAAGGG
AACGTCATCG ACCCACTGGA TATGGTGGAC GGCATTTCGC TGGAAGCGCT GCTGGAAAAA
CGTACCGGCA ACATGATGCA GCCGCAGCTG GCAGAAAAAA TCCGCAAGCG TACCGAGAAA
CAGTTCCCGA ACGGCATCGA GCCTCACGGT ACAGACGCCC TGCGCTTTAC GCTGGCGGCG
CTGGCTTCAA CTGGCCGCGA CATCAACTGG GATATGAAGC GTCTGGAAGG TTACCGCAAC
TTCTGTAACA AGCTGTGGAA TGCCAGCCGT TTTGTGTTGA TGAACACCGA AGATCAGGAC
TGTGGTTTTG GCGCAGGCGA GAAAGTGCTG TCGCTGGCTG ACCGCTGGAT TCTGGCAGAA
TTCAACCGTA CGGTGAAAGC CTATCGCGAA GCGCTGGACG GCTATCGCTT TGATATTGCT
GCCGGTATTC TGTACGAATT CACCTGGAAC CAGTTCTGCG ACTGGTATCT GGAGCTGACG
AAGCCTGTGA TGAATGGCGG CTCAGAAGCA GAGTTGCGCG GTACACGCCA TACGCTGGTT
ACTGTACTGG AAGCGCTGCT GCGTCTGGCG CACCCAATTA TTCCGTTCAT TACCGAAACC
ATCTGGCTAC GCGTTAAAGC GCTGAAAGGC ATTAGCGCCG ACACGATCAT GTTGCAGCCG
TTCCCTGAGT TCGATGCCTC GCAGGAAGAT ACGCTGGCGT TGAACGATCT GGAGTGGATC
AAGCAGGCGA TCATCGCCGT GCGTAACATT CGTGCGGAAA TGAACATCGC GCCGGGCAAA
CCGCTGGAAG TGTTACTGCG TGACGCCACG GCTGAAGCAC AGCGTCGCGT GGAAGAGAAC
CGCAGCTTCA TCCAAACGCT GGCGCGTCTG GAAAACATCA CAGTGCTGCC TGCAGGCGAT
AAAGGTCCGG TTTCCGTCAC TAAACTCATC GACGGCGCCG AGCTGCTAAT TCCTATGGCT
GGCCTGATCG ACAAAGCAGC AGAGCTGGAT CGTCTGGCGA AAGAAGTGGC GAAAATCGAA
GCTGAGATTG GCCGCATCGA AAGCAAGCTG TCCAACGAAG GCTTTGTGGC GCGCGCGCCG
GAAGCGGTCG TCGCCAAAGA GCGTGAGAAG ATGGACGGCT ATGCCGTAGC GAAAGCCAAA
CTGCTGGAAC AGCAAGCGGT CATCGCCGCA CTGTAA
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| Protein sequence | METKYNPQDI EQPLYEHWEK QGYFKPHGDT SKESFSIMIP PPNVTGSLHM GHAFQQTIMD
TLIRYQRMQG KNTLWQAGTD HAGIATQMVV ERKIAAEEGK TRHDYGREAF IDKIWQWKGE
SGGNITRQMR RLGNSVDWER ERFTMDEGLS NAVKEVFVRL YKEDLIYRGK RLVNWDPKLR
TAISDLEVEN REVKGSMWHL RYPLADGVKT AEGKDYLVVA TTRPETMLGD TGIAVNPEDP
RYKDLIGKEV ILPLIGRRIP IVGDEHADME KGTGCVKITP AHDFNDYEVG KRHQLPMVNI
LTFDGDIRQS AEVFDTNGEA STVYSSDIPE AFQGLERFAA RKALVAAFDE LGLLEEIKAH
DLTVPYGDRG GVVIEPMLTD QWYVRAAVLA KPAVEAVEDG RIQFVPKQYE NMYFSWMRDI
QDWCISRQLW WGHRIPAWYD ANGNVYVGRT ESEVRSENNL ADDVVLNQDE DVLDTWFSSG
LWTFSTLGWP EQTPDLKAFH PSSVMVSGFD IIFFWIARMI MLTMHFIKDE DGKPQVPFHT
VYMTGLIRDE EGQKMSKSKG NVIDPLDMVD GISLEALLEK RTGNMMQPQL AEKIRKRTEK
QFPNGIEPHG TDALRFTLAA LASTGRDINW DMKRLEGYRN FCNKLWNASR FVLMNTEDQD
CGFGAGEKVL SLADRWILAE FNRTVKAYRE ALDGYRFDIA AGILYEFTWN QFCDWYLELT
KPVMNGGSEA ELRGTRHTLV TVLEALLRLA HPIIPFITET IWLRVKALKG ISADTIMLQP
FPEFDASQED TLALNDLEWI KQAIIAVRNI RAEMNIAPGK PLEVLLRDAT AEAQRRVEEN
RSFIQTLARL ENITVLPAGD KGPVSVTKLI DGAELLIPMA GLIDKAAELD RLAKEVAKIE
AEIGRIESKL SNEGFVARAP EAVVAKEREK MDGYAVAKAK LLEQQAVIAA L
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