Gene PC1_0370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0370 
Symbol 
ID8131284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp424559 
End bp425023 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content51% 
IMG OID644863650 
Producthypothetical protein 
Protein accessionYP_003015965 
Protein GI253686775 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2731] Beta-galactosidase, beta subunit 
TIGRFAM ID[TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACTG GCAATGTCCA CCACCTTGAA CTGGTTCCTT ATCTGCCTGC CAAACTGCGT 
GAAGCAATTG AATATGTGAA GAAAAACATT ACGGCGGATA CCCCGCTGGG CAAGCATGAT
ATCGAGGGCA ACAGCGTGTT TGTGCTGATC TCCAACGACA GCACCGATCT GCTGGAAAAA
CGCCGCGCCG AGTATCACGC CAAATATCTG GACATTCAGA TTGTGCTGTC CGGCGTGGAA
GGGATGACGT TCAGTAACCT GCCTGCGGGC AAGCCGGATA CCGATTGGTT GGCGGATAAA
GATATTGCCT TCCTGCCATC GGGTGAACAG GAAAAACAGT TTGTGATGCA GGAAGGGGAT
TTTGTCGTCT TCTTCCCAGG TGAAGTACAC AAACCGCTGT GTGCTGTTGG TGAACCGGCA
CACGTACGCA AAGCTGTAGT GAAAATCGAC GCGTCGCTGG TGTAG
 
Protein sequence
MITGNVHHLE LVPYLPAKLR EAIEYVKKNI TADTPLGKHD IEGNSVFVLI SNDSTDLLEK 
RRAEYHAKYL DIQIVLSGVE GMTFSNLPAG KPDTDWLADK DIAFLPSGEQ EKQFVMQEGD
FVVFFPGEVH KPLCAVGEPA HVRKAVVKID ASLV