| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0361 |
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| Symbol | |
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| ID | 8131275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 417973 |
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| End bp | 418710 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644863641 |
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| Product | 20S proteasome A and B subunits |
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| Protein accession | YP_003015956 |
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| Protein GI | 253686766 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3484] Predicted proteasome-type protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGTACT GTGTCGCCAT GTGTCTGTCT GACGGCCTGG TTTTTGCCTC CGATTCCCGC
ACGAATGCGG GCGTCGATCA CATTGCAACG TTCAAGAAAC TCTATGTTTT CCAGCATGAG
AATGAACGCG TGTTAGTGAT CCAATGCGCG GGAAACCTGG CGACAACGCA AAGCATTATT
AGCCTGCTCA ACGCCCGTAT TGACGCGCAG CATACGCCAA ATCTCATGCA GGTTAACTCC
ATGTATGACG CCGCGATGTT GCTCGGGGAA ACCGTGCGAG AAGTGATTCA CCGCGATAGC
AGCGTTCAGC AGAACGGCAG CAATACCAAT TTCGGCTGCA ACCTGCTGCT AGGCGGCCAG
ATTGGCGGTG AAACACATCG GCTGTTTCAT ATTTACCCTG AAGGTAACTT CATTGAGGCC
ACGCCGGATA CCCCGTATTT CCAGATCGGC GAGAGTAAGT ACGGAAAACC GATCATCGAT
CGCGTGTTGA CGATGGATAC CCCTCTGGAA CAAGCCATGT GCTGTGCGCT GATTTCTATC
GATTCCACCT TGCGCAGTAA TCTGTCGGTC GGTCTGCCAC TGGATGTCAT GATTTACCGC
ACCGGCAGTT TTGCCAGCAC TGAACAACAA CGCATTACGG AAAACAACGC CTACTTCACG
ACGATCCGTA AAGCCTGGTC GGAAGGGCTA CTGAATACTT TCCGCCAGCT TCCTCCGTTC
CCCGATATTC AACCGTAA
|
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| Protein sequence | MTYCVAMCLS DGLVFASDSR TNAGVDHIAT FKKLYVFQHE NERVLVIQCA GNLATTQSII
SLLNARIDAQ HTPNLMQVNS MYDAAMLLGE TVREVIHRDS SVQQNGSNTN FGCNLLLGGQ
IGGETHRLFH IYPEGNFIEA TPDTPYFQIG ESKYGKPIID RVLTMDTPLE QAMCCALISI
DSTLRSNLSV GLPLDVMIYR TGSFASTEQQ RITENNAYFT TIRKAWSEGL LNTFRQLPPF
PDIQP
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