| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0354 |
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| Symbol | |
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| ID | 8131268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 410394 |
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| End bp | 411746 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644863634 |
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| Product | Pyridoxal-dependent decarboxylase |
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| Protein accession | YP_003015949 |
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| Protein GI | 253686759 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.164346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC TGACATTACT GGCTGATGCC GACGAGCGCG GCCGACGCTA TCTGGCTGAG
AATGCACAGC GTCGGGTTTT CCCCGATGCC GCTGCCCTCG CCGCGCTGGC ACGTTTTGAT
GAAGCGCTGC CGCAACAGGG CTTCTCGCCC GAAAGCACGC TGACGCTGCT GGATGAGGTC
GGCTCACCGG CTACCACTGC CTCCAATGGC CCAAACTATT TTGGCTTTGT TATCGGTGCC
TCATTGCCGG TCGCCGCCGC CTCGGAGCGA TTAATGATCG CCTGGGATCA ATGCGCCTCC
ACCTTTGATA ACTCGCCAGT ATCCGCCACG CTGGAACGCC TCGCCAGCCG CTGGGTACTC
GATGCGCTGA ACTTGCCCAA AGACAGCGCC GTGGGTTTCG GTACCAGCGC TACCGCCTGC
ACGCTTTCCT GCCTGGCCGC CGCGCGTCGT GCTCTGCTGG CAAAACAGGG CTGGGATTTT
GACAACGATG GACTGAACGG TGCGCCTGAA ATTACGGTCG TGATTTCGGA ACTGACGCAC
ATCACGGTGA AGAAAGCACT GCGCGTACTC GGCTTTGGGC TGCGCCATTT ACGCATCGCG
CCTGTTAATG CATATGGGCA GATCGATGTC GCACAGCTTC CTCCGCTGGA CGATCGCACC
ATTCTGTGTT TACAGGCGGG TGAGGTCAAC ACAGGCGAAT TCGATGACTT TGCGCAGATC
ATTCCAATCG CTAAAGCAGC AGGTGCCTGG GTTCACGTTG ATGGCGCCTT CGGACTCTGG
GCCAGAGCCT CATCTCACGC GACGCTCACT GAGGGCATCG AACTGGCCGA CAGTTGGACA
ACAGACGCGC ATAAATGGCT GAACACCCCC TACGACTGCG CGATGGCGAT TTGCCGCGAT
GCGGATGCGC TGGCCGAAGC GATGAACGCG GATGCCGTCT ATTCCAGTGC GGCGCGAGAT
GCCCAGAAGA ACCTGACACT CGAATTTTCC CGCCGTCCAC GCGGCATTCC GGTATGGGCG
GTACTGCGTA CGCTGGGGCG CGACGGCGTG GCAGAGATGG TCGAACGACA CTGCCGACAG
GCAGCATTCA TTGCCGACGG CCTGCGCCAT GCGGGTTTTG AAGTACTGAA TCGGGTTGTG
CTTAATCAGG TTCTGCTGCG AGGGGAAACC GACGGCCAGA CGACAGCAAT ACGAGACGCG
TTGCAGGCGT CGGGCAAAGC ATGGTTTGGC GGCACGGTGT GGCAAGGGCG TCCGGCATTG
CGCATCAGCG TGTCATCCTG GCGCACGCAG GACGACAACG TGCAGGCGCT CATCACGCTG
CTGACGGAAA TCAAAGCTCG AACCCCACGC TGA
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| Protein sequence | MSELTLLADA DERGRRYLAE NAQRRVFPDA AALAALARFD EALPQQGFSP ESTLTLLDEV
GSPATTASNG PNYFGFVIGA SLPVAAASER LMIAWDQCAS TFDNSPVSAT LERLASRWVL
DALNLPKDSA VGFGTSATAC TLSCLAAARR ALLAKQGWDF DNDGLNGAPE ITVVISELTH
ITVKKALRVL GFGLRHLRIA PVNAYGQIDV AQLPPLDDRT ILCLQAGEVN TGEFDDFAQI
IPIAKAAGAW VHVDGAFGLW ARASSHATLT EGIELADSWT TDAHKWLNTP YDCAMAICRD
ADALAEAMNA DAVYSSAARD AQKNLTLEFS RRPRGIPVWA VLRTLGRDGV AEMVERHCRQ
AAFIADGLRH AGFEVLNRVV LNQVLLRGET DGQTTAIRDA LQASGKAWFG GTVWQGRPAL
RISVSSWRTQ DDNVQALITL LTEIKARTPR
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