| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0341 |
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| Symbol | |
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| ID | 8131255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 395500 |
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| End bp | 396690 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863621 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_003015936 |
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| Protein GI | 253686746 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGCA AAAAAACGGC AACAGCGTTA GTCGCCGCAG GACGCAGCAA GAAATTCACC
CACGGTTCCG TAAACCCCGT TATTCAGCGC GCTTCCTCTC TGGTATTCGA TACCGTGCAG
GACAAGAAGC ACGCCACCAT TAACCGAGCC AAAGGCGCGT TGTTCTATGG TCGCCGCGGT
ACGCTGACCC ATTTCGCATT TCAGGAAGCG ATGGTGGAGC TGGAAGGCGG TGTAGGCTGC
GCGTTGTACC CCTGTGGTGC CGCTGCCATT TCTAACGCAA TCCTCTCTTT CGTTGCGGCA
GGCGATCACA TTCTGGTGAC GGAGTCGGCC TACGAACCGA CACAGGATTT CTGCACGAAA
GTGCTTAACA AGCTGAACGT CAGCACCACC TATTTCAACC CGCTCATCGG TGCCGATATT
GCCGAACTGA TCCAACCCAA TACCAAAGTT GTCTTTCTCG AATCGCCGGG CTCCATCACC
ATGGAAGTCC ATGATGTGCC CGCGATCGTA CAGGCCGTGC GCCGCATCAA TCCCGAGATT
GTTATCATGA TTGATAACAC CTGGGCAGCG GGCATTTTAT TTAAAGCATT CGACTTCGAT
ATTGATATCT CTATCCAGGC GGGTACGAAA TACATCGTTG GCCATTCCGA TGCCATGCTC
GGCACGGCAG TGGCGAATGA GCGCTGCTGG GCACAACTGC GCGAGCATTC CTATCTGATG
GGACAAATGG TGGACGCCGA TACCGCCTAT GTCGCCAGCC GTGGCCTGCG CACGTTGGGC
GTCAGGCTCA AACAGCATCA GGAAAGCAGT ATCCGCATTG CGAAGTGGCT GGCAGAACGG
CCAGAAGTCG CTGTCGTTAA TCACCCTGCG TTGCCAGAAT GCAAAGGGCA TGAATTCTAC
GTCCGCGATT TTAACGGCTG CAACGGCTTG TTCTCCTTTG TGCTGAAGGA GAAATTAAGC
AAGGAAACGC TGGCGCACTA TCTGGATCAT TTTGAACACT TCAGCATGGC GTATTCCTGG
GGGGGCTTCG AGTCTCTGAT TCTGGCGAAT CAACCGGAAG AACTCGCGGC GATCCGCCCG
GCGAGCGGTG TGGATTTTAC CGGCACACTT ATTCGGTTAC ATATTGGACT TGAAGACAGT
GACGATCTGA TCGACGATCT GGCCGCGGGT TTCAGCAGGC TGAGCGCCTA G
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| Protein sequence | MTSKKTATAL VAAGRSKKFT HGSVNPVIQR ASSLVFDTVQ DKKHATINRA KGALFYGRRG
TLTHFAFQEA MVELEGGVGC ALYPCGAAAI SNAILSFVAA GDHILVTESA YEPTQDFCTK
VLNKLNVSTT YFNPLIGADI AELIQPNTKV VFLESPGSIT MEVHDVPAIV QAVRRINPEI
VIMIDNTWAA GILFKAFDFD IDISIQAGTK YIVGHSDAML GTAVANERCW AQLREHSYLM
GQMVDADTAY VASRGLRTLG VRLKQHQESS IRIAKWLAER PEVAVVNHPA LPECKGHEFY
VRDFNGCNGL FSFVLKEKLS KETLAHYLDH FEHFSMAYSW GGFESLILAN QPEELAAIRP
ASGVDFTGTL IRLHIGLEDS DDLIDDLAAG FSRLSA
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