Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0338 |
Symbol | |
ID | 8131252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 392528 |
End bp | 393268 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644863618 |
Product | nitroreductase |
Protein accession | YP_003015933 |
Protein GI | 253686743 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA CGATTGAACT GTTCACCTCA CATCGCAGTG AACGCAGCTA TCTTGATAAA GCGATTCCCG ATGACGTGCT GGATGCCATT ATTCAGTCCG CCCATCTGGC ACCGACATCC GTGAACTCTC AGCAGGTTTC GCTCATCGTC ACCCGCGACC CGGAACGCAA GGCACGCATC GCCGAGTTGG CTGGCGGCCA GCCGTGGATT GCCAAAGCGC CCGTCTTTAT TACCGTGGTA CTGGATATGC ATAAAACGCA GGTCGGGATT GCCATGAGCG GAAAGCAGCA ACACGCGCAT GAAAGCCTCG AAAGCCTGAT CGCTGGCACA ACGGATGTCG GTATCGCGCT TGGCACGCTG ATGGCCGCGG CACGCTCATT TGGTCTGGGC ATCGTCCCGA TTGGCGGCAT TCGTCGCGAG CCGCAGGCGA TGATCGATTT TCTGGAACTG CCTGAACTGA CGTTCCCCGT CGCAGGCGTC GCTATCGGTT ATGTGGACAC CCCTGCGCAT CAAAAACCAC GCCTGCCGCT GAATTCATTC CGCCATGATG AAACCTATCA TCAGGACGTT CTGCCTGCGG CTATCGAGCA ATATAACCAA ACGCTGGTGA CACACTGGCA GCAAACCGGC CGCGCAGACG GTGACAACTG GGGTGATAAC ACCGCCAGCT ACTATCAGCA CATTTATTTC CCGAAAGTCT TACCCGCGAT CCTCCAACAG GGCTTTAAAC TGGACAAATA A
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Protein sequence | MNKTIELFTS HRSERSYLDK AIPDDVLDAI IQSAHLAPTS VNSQQVSLIV TRDPERKARI AELAGGQPWI AKAPVFITVV LDMHKTQVGI AMSGKQQHAH ESLESLIAGT TDVGIALGTL MAAARSFGLG IVPIGGIRRE PQAMIDFLEL PELTFPVAGV AIGYVDTPAH QKPRLPLNSF RHDETYHQDV LPAAIEQYNQ TLVTHWQQTG RADGDNWGDN TASYYQHIYF PKVLPAILQQ GFKLDK
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