| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0338 |
|---|
| Symbol | |
|---|
| ID | 8131252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 392528 |
|---|
| End bp | 393268 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644863618 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_003015933 |
|---|
| Protein GI | 253686743 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA CGATTGAACT GTTCACCTCA CATCGCAGTG AACGCAGCTA TCTTGATAAA
GCGATTCCCG ATGACGTGCT GGATGCCATT ATTCAGTCCG CCCATCTGGC ACCGACATCC
GTGAACTCTC AGCAGGTTTC GCTCATCGTC ACCCGCGACC CGGAACGCAA GGCACGCATC
GCCGAGTTGG CTGGCGGCCA GCCGTGGATT GCCAAAGCGC CCGTCTTTAT TACCGTGGTA
CTGGATATGC ATAAAACGCA GGTCGGGATT GCCATGAGCG GAAAGCAGCA ACACGCGCAT
GAAAGCCTCG AAAGCCTGAT CGCTGGCACA ACGGATGTCG GTATCGCGCT TGGCACGCTG
ATGGCCGCGG CACGCTCATT TGGTCTGGGC ATCGTCCCGA TTGGCGGCAT TCGTCGCGAG
CCGCAGGCGA TGATCGATTT TCTGGAACTG CCTGAACTGA CGTTCCCCGT CGCAGGCGTC
GCTATCGGTT ATGTGGACAC CCCTGCGCAT CAAAAACCAC GCCTGCCGCT GAATTCATTC
CGCCATGATG AAACCTATCA TCAGGACGTT CTGCCTGCGG CTATCGAGCA ATATAACCAA
ACGCTGGTGA CACACTGGCA GCAAACCGGC CGCGCAGACG GTGACAACTG GGGTGATAAC
ACCGCCAGCT ACTATCAGCA CATTTATTTC CCGAAAGTCT TACCCGCGAT CCTCCAACAG
GGCTTTAAAC TGGACAAATA A
|
|---|
| Protein sequence | MNKTIELFTS HRSERSYLDK AIPDDVLDAI IQSAHLAPTS VNSQQVSLIV TRDPERKARI
AELAGGQPWI AKAPVFITVV LDMHKTQVGI AMSGKQQHAH ESLESLIAGT TDVGIALGTL
MAAARSFGLG IVPIGGIRRE PQAMIDFLEL PELTFPVAGV AIGYVDTPAH QKPRLPLNSF
RHDETYHQDV LPAAIEQYNQ TLVTHWQQTG RADGDNWGDN TASYYQHIYF PKVLPAILQQ
GFKLDK
|
|---|
| |