| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0322 |
|---|
| Symbol | |
|---|
| ID | 8131236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 374110 |
|---|
| End bp | 374691 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644863602 |
|---|
| Product | NAD(P)H dehydrogenase (quinone) |
|---|
| Protein accession | YP_003015917 |
|---|
| Protein GI | 253686727 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACA TTTTACTGAT TGATGCAGGC AAATCATTCG CTCACTCCAA AGGTGAGTTG
AACCATACCC TTACCGAGGT CGCCGCCAGT TTCCTGCGCG ACAAAGGTCA CGACGTCCGC
GTGACGGTCG TGGACAGCGG CTACGATATT GAACAGGAAA TTCAGAACTA CCTATGGGCG
GATACCATCA TTTACCAGAT GCCGGGATGG TGGATGGATA CGCCGTGGAT CCTGAAGAAA
TACATCGATG ACGTATTTAC TGCCGGCCAC GGCTCGCTTT ACGCCAGCGA TGGCCGCAGC
CGTTCGGATG CCAGCAAGAA ATACGGTTCT GGCGGGCTGT TACAAGGCCG CAAATATATG
CTGTCTCTAA CGTGGAATGC GCCGCTGGAA GCCTTCGACG ATCCTGAACA GTTCTTCCAC
GGTGTGGGCG TGGACGGCGT GTATCTGCCG TTCCATAAGG CGAACCAGTT TATCGGGTTA
TCCCCCTTGC CGACCTTCAT CTGCAACGAT GTGATAAAGG CACCGGACGT CCCTGCTTAT
CTTGTAAACT ACCGCCAGCA TCTGGATGAA CTCTTTGCCT GA
|
|---|
| Protein sequence | MQNILLIDAG KSFAHSKGEL NHTLTEVAAS FLRDKGHDVR VTVVDSGYDI EQEIQNYLWA
DTIIYQMPGW WMDTPWILKK YIDDVFTAGH GSLYASDGRS RSDASKKYGS GGLLQGRKYM
LSLTWNAPLE AFDDPEQFFH GVGVDGVYLP FHKANQFIGL SPLPTFICND VIKAPDVPAY
LVNYRQHLDE LFA
|
|---|
| |